Syngnathus scovelli (Gulf pipefish): 125989809
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Entry
125989809 CDS
T08785
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125989809 (med23)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
125989809 (med23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
125989809
NCBI-ProteinID:
XP_049612102
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All DBs
Position
20:11886401..11894361
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AA seq
1438 aa
AA seq
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MALTMETQLQSIFEDVVKTEMVEEAFAGMCMDSPEDERTKLDSCLGAFRQYWGTLPQESH
EQCVQWIVRFTHGQHSPKRISFLYDCLAMAVETNVLPPRMVCTALISSDNLEWERTQLWA
LTFGLIRKIIGGVDYKGVRDLLKAVLDKIQTVPITVSSAIVRQLLTAREVVEYILDRNAC
LLPAYFAITEIRKLYPEGQLSHWLLGSCVSDFVDSFRPTARINSICGRCSLLPVVNNSGA
ICNSWKLDPSTLRFPLKGMLPFDKDLFEPQTGLLRYVLEQPYSREMVCNMLGLSKQTLNI
AQQKQRCPVLEEQLVDLVVYAMERSETEEHFDADAGGTSQLLWQHLSSQLIFFVLFQFAS
FPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALGDFLPVMKLFDLLYPEKEC
IPVPDINKPQSTHAFAMTCIWIHLNRKAQGDSNLQIPIPHSLKLHHEFLQQSLRNKSLGM
SDYKIALLCNAYSTNSDCFSVPMGALVETIYGTQSMRINLPGTNCMALGSFTPLPMNLLD
SVTVHAKMSLIHSIATRVIKLAHAKSSLALAPALVETYSRLLVYMEIESLGIKGFISQLL
PNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTA
LRLITALGSSEVQPQFTRFLSDPKTVLSVESEELNRALILTLARATHVTDFFTGSDSIHG
TWCKDILQTIMNFTPHNWAAHTLSCFPAPLQAFFKQNNVPQEPRFNLKKNVEEEYRKWKS
MTNEEDIITHFSMQGSPPFFLCLLWKMLLETDHINQIGYNVLERIGARALVAHMRTFADF
LVYEFSTSPGGPQLNKCIEILNDMVWKYNIVTLDRVILCLAMRSHERNEAQVCYFIIQLL
LLKSDDFRNRVNDFVKENAPEHWLQSDWHNKHMSYHKKYPEKLYFEGVAEQLNPPMPVQH
QYMPIYFGNVCLRFLPVFDIVIHRFLELIPVSKSLETLLDHLGGLYKFHDRPVTYLYNTL
HYYERHLRDRTSLKRKLVHAIMLSLKDNRTPGWCLSETYLKFGMNQRDDNVWTPDDTYYC
KLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLNV
VLKSQPLVPRENITAWMNAIGLVITALPEPYWIVLHDRIVTVMSSPALASETAWSRDPFA
LLDFTACHQSYSEIGCSYVLALAHAVWHHSSIGQLSLIPKFLSETLKPVVQTEFQLLYVY
HLVGPFLQRFQQERTRCMLEVCLPLTLLAFVLLFAKHKHNGGECVFQIGVAFYEMLQVVD
QHCQHLNYMDPICDFLYHIKYMYTGDSVKEQVEKIIVTLRPAMKLRLRFVTHSSKTDPSS
SAPASSAPPAAAVSAPAVPVAVNSAPQPLSSSSSSMGPVAVGGGSTASPSSQHAHPSM
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaacgatggagacgcagctccagagcatctttgaggatgttgtgaaaacggag
atggtggaggaggcctttgctgggatgtgcatggacagtccagaggacgagaggacaaag
ttggacagctgtctcggggcctttcgccaatactggggaacgctgcctcaggagtctcac
gagcagtgcgtgcagtggatcgtgcggttcacgcacggccagcacagtcccaaaaggatc
tccttcctctatgactgtctggccatggccgtcgagacgaatgtcttgccgccgaggatg
gtgtgcactgctctgatcagctcagacaacttggagtgggaaaggactcaactgtgggcg
ctgaccttcggactcatccgaaaaatcatcggcggggtagactacaagggcgttcgagac
ctgctgaaagccgtgctggataaaatccagaccgttcccatcaccgtcagctcggccatc
gtgcgccagttgctgacggccagagaggtggtggagtacatcttggacaggaacgcctgc
ctcctgcccgcctactttgccatcacggagatccgcaaactgtatccggagggacagctg
tcgcactggcttctcggcagctgcgtatccgattttgtggacagtttccggcccaccgcc
agaatcaactccatctgcggtcgttgtagcctgttgccggtggtgaacaacagtggcgcc
atctgcaattcctggaagctggaccccagcacgctgcgcttcccgctcaaaggcatgctg
cccttcgataaggacctgtttgagccgcagacgggcctgctgcgctacgtgctggagcag
ccctattctagagaaatggtgtgcaacatgttgggactcagcaaacagactctgaacatt
gcccagcaaaagcagcgctgtcccgtgctggaggagcagctggtggacctggtggtgtac
gccatggagcgctcggagacggaggagcactttgacgccgacgcgggcggcaccagccag
ctgctgtggcagcacctgtcgtcgcagctcatcttcttcgtcctcttccagttcgccagc
ttcccgcacatggtgctctcgctgcaccagaagcttgcaggaaggggtcttatcaaaggg
agggaccacttgatgtgggtcctgctgcagttcatatcaggaagcatccagaagaacgcc
ttgggcgatttccttcccgtcatgaagctctttgacctgctgtatcccgaaaaggagtgc
attcccgttccggacattaacaagccccagtccacccacgcctttgccatgacctgcatc
tggatccacctcaaccgcaaggcgcaaggcgactccaacctgcagattcccatcccgcac
tcgctcaaactgcaccacgagttcctgcagcagtcgttgcgcaacaagtctctgggcatg
tccgactacaagatcgccctgctgtgcaacgcctacagcaccaactcggattgcttcagc
gtgcccatgggcgccctggtggagaccatctacggcactcagtccatgagaatcaacctg
ccgggcaccaactgcatggcgctgggctccttcacgccgctgcccatgaacctgctggac
tcggtcaccgtgcacgccaagatgagtctgatccacagcatcgccacgcgggtcatcaag
ctggcgcacgctaagtccagcctcgccctggcgcccgccttggtggagacgtacagccga
ctgctggtctacatggagatcgagtcgctgggcatcaaaggcttcatcagccagctgctg
cccaacgtcttcaagtctcacgcgtggggaatccttcacactctgctggagatgttcagc
taccgcatgcaccacatccagccgcactaccgcgtccagttgctcagtcacctgcacagt
ctggccgccgtgccgcagaccaaccagaaccagctgcatctctgcgtggagagcacggcc
ttgcgcttgatcacggcgctgggcagctcggaggtgcagccgcagttcacccgcttcctc
agcgaccccaagacggttctgtcggtggaatcggaggagctgaatcgagcgctcatcctc
accctggccagagccacgcacgtcaccgatttcttcacaggctccgactccatccacggc
acgtggtgtaaggacatcctccagaccatcatgaacttcacccctcataactgggccgcg
cacaccctgtcctgcttcccggcgccgctgcaggccttcttcaagcagaacaacgttcct
caggagccgcgcttcaacctgaagaagaacgtggaggaggagtaccgcaagtggaagtcc
atgaccaacgaggaggacatcatcacgcacttctccatgcagggctcgccgcctttcttc
ctctgcctgctgtggaaaatgctgctggagactgaccacatcaaccagattggctacaac
gtcctggagcgaatcggggcccgcgctctggtggcccacatgcgcactttcgccgacttc
ctcgtgtacgagttctccacgtcgcccggcggcccgcagctcaacaagtgcatcgagatc
ctcaacgacatggtgtggaagtacaacattgtcacgctggacagagtcatcctgtgtctg
gcgatgcgcagccacgagcgcaacgaggcccaggtgtgctacttcatcatccagctgctg
ctgctcaagtcggacgacttccgcaacagggtcaacgactttgtcaaggagaacgcgccc
gagcactggctgcagagcgactggcacaacaagcacatgagctaccacaagaaatacccg
gagaagctgtactttgagggcgtggcggagcagctcaacccacccatgccggtgcagcac
cagtacatgcccatctactttggcaacgtgtgcctgcgcttcctgcccgtctttgacatt
gtcatccaccgcttcctggagctcattcccgtctccaagtcgctggagaccctactggac
cacctgggcggcctctacaagttccacgaccggccggtgacttacctgtacaacaccttg
cactactacgagcgccacctgagggacagaaccagcctcaagcggaagctggtgcacgcc
atcatgttgtcactcaaggacaaccgcactcccggttggtgcctgagcgagacctacctg
aagttcggcatgaaccaaagagacgacaacgtttggacgcccgacgacacctactactgc
aagctgattggacgcctggtggacaccatggcgggcaagtcgcccggccccttccccaac
tgcgactggcgcttcaacgagttccccaatccggcggctcacgccctgcacgtcacttgc
gtggagctgatggcgctggccgtgcccggcaaggacgtgggcaacgcgctcctcaacgtc
gtcctcaagagtcaacctctggtgccccgcgagaacatcacagcctggatgaacgccatc
ggcctggtcatcaccgccttgcccgaaccgtactggatcgtgctgcacgaccgcatcgtg
acggtgatgagctcgccggcgctggcgtcggagacggcctggtcgcgggaccctttcgcc
ctgctggacttcaccgcctgccaccagagctacagtgagatcggctgcagctacgtgctg
gcgctggcgcacgccgtctggcaccactcgtccatcggacagctctcgctcattcccaag
ttcctctcggagacactgaagccggtggtccagacagagttccagctgctgtatgtgtat
cacttggtgggacctttcctgcagcgcttccagcaggagaggacgcgatgcatgctggag
gtttgtttgcctttgacacttttggcatttgtgcttttgtttgcaaagcacaaacacaac
ggcggcgagtgtgtcttccagatcggcgtggccttctacgagatgctgcaggtggtggac
caacactgccagcatctcaactacatggaccccatctgcgacttcctctaccacatcaag
tacatgtacacgggcgacagcgtcaaggagcaggtggagaaaatcatcgtcaccctcagg
ccggccatgaagcttcgtcttcgcttcgtcacgcacagcagcaagacggacccgtcgtct
tcggcgcccgcctcgtcggcgccgccggcggccgccgtctcggcgcccgccgttcccgtc
gccgtcaactcggcgcctcagcctttgtcctcctcgtcctcctcaatggggcccgtggcc
gttggcggcggcagcaccgcttcgccgtcttcgcaacacgcgcacccctccatgtag
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