Syngnathus scovelli (Gulf pipefish): 125989817
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Entry
125989817 CDS
T08785
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03410
Base excision repair
sscv04210
Apoptosis
sscv04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125989817 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125989817 (parp1)
04217 Necroptosis
125989817 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sscv03032
]
125989817 (parp1)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125989817 (parp1)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125989817 (parp1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
125989817 (parp1)
DNA replication proteins [BR:
sscv03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125989817 (parp1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
125989817 (parp1)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
125989817 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
125989817
NCBI-ProteinID:
XP_049612127
LinkDB
All DBs
Position
20:11780010..11786507
Genome browser
AA seq
1021 aa
AA seq
DB search
MADSQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSPSDIDGFSALRWEDQEKVKKAIESGGTAGGGKGAKKGGGGAQAEKTLNGFAVEY
AKSNRSTCKGCELKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVGRREELDFKPEYS
GAQLKGFNALKAEDKEELKKRLPAVKVEGKRKNEEVDGVSKKQKKEEDAEKKKLDAQLKD
QSQLIWSIKDKLRKHCSINDMKELLIANGQEVPSGESNVVDSLADGMAFGALEPCKECLG
QLVFKGDAYYCSGDISAWTKCVYRTTKPQRKDWLTPKEFHEVPFLKKFKFERQDRVYPQE
AAPAPSQAALKAEPLAGVSGVPAAPLPEGGPPDKPLSGMKLLTVGKLSKNKDEVKAAVEE
LGGKIGTVANKASLCISTKKEVEKMGKKMEEAKEAGVRVVSEEFLTEVKSSGKALGELVS
LHAISPWGAEVKVEAPAAAAAPPSKSGAAASSKSAGRVKEEEGKSKAKKMKLTVKGGAAV
DPDSGLENSAHVLEQNGKMYSATLGLVDIMRGTNSYYKLQLLEDDVQKRYWVFRSWGRVG
TTIGGNKLDKIGDKNSALNNFLSVYKEKTGNVWGASNFTKYPNKFYPLEIDYGQDEEAVK
RLTATAGTKSKLAKPIQDLIKQIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALL
TEVQQAVSDNAAESHVLDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEV
AYSLLRGGAQDNQSDPIDINYEKLKTDIEVVDKGTPEADIILQYVKNTHAATHNTYTLEV
QEIFKIKREGERQRFRPFEELHNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGK
GVYFADMVSKSANYCHTSQSDPVGLLLLAEVALGNMHELKKASHITKLPKGKHSVKGLGR
TAPESTATATLDGVEVPLGKGVNTNIDDTSLLYNEYIVYDVAQINLKYLLKIKFNYQTSL
W
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcggactctcaagaggacaagctctacaaggccgagtacgccaagagcggccgcgcg
tcgtgtaagaagtgcaaggaaaacatcgccaaagactcgctccgaatggccatcatggtg
cagtcaccaatgtttgatggcaaggttccacactggcatcacttctcttgcttctggctg
cgagcggcggcccagtccccttccgacatcgacggcttctccgcccttcgctgggaagac
caggagaaagtcaagaaggccatcgaaagcggcggaaccgccggaggaggaaaaggggct
aagaaaggcggcggcggcgcgcaagcggagaagacgctcaacggctttgccgtcgaatac
gccaaatccaaccgcagcacatgcaagggctgcgagttgaaaatagaaaaggatcagatc
cgcgtgtcgaagaagacggtggatccggagaagccccagctgggcctgatcgaccgctgg
taccacacggcctgcttcgtgggccgcagggaggagctggacttcaagccggagtacagc
ggcgcccagctcaagggcttcaacgcgctcaaggccgaagacaaggaggagctcaagaag
aggctcccggcagtcaaagtggaaggaaagcgcaaaaacgaagaggtggacggagtgtca
aagaagcagaagaaggaggaggatgcggaaaagaaaaaattggacgctcagttgaaggac
caaagccagctgatctggagcattaaagacaaactgaggaagcattgctccatcaacgac
atgaaggagctgctcattgctaacggccaggaggttccttcgggagagtccaacgttgtg
gacagcttggccgacggcatggccttcggcgcgctggaaccctgcaaggagtgcttgggc
cagttggtcttcaagggcgatgcctattactgctccggggatatctcggcctggacaaag
tgcgtgtacagaaccaccaaaccccaacgcaaagactggctcacccccaaggaattccac
gaggttcctttcctcaagaagttcaagtttgagcgtcaggacagagtttacccccaggag
gcggcccccgctccgagccaagccgccctcaaagccgagcctctggctggcgtctccggc
gtccccgctgcgccgctgccggagggcggccctcccgacaaacctctcagcggcatgaag
ctgctgactgtcggcaaactgtccaagaataaagatgaggtcaaggcagccgtggaggag
ctgggggggaagatcggcacggtggccaacaaggcttctctctgcatcagcaccaagaag
gaggtggagaagatgggcaagaaaatggaggaggccaaggaggcgggcgtgcgcgtggtc
tccgaggagttcctcaccgaggtcaagtcgtcgggcaaagcgctcggggagctggtctcc
ctgcacgccatctccccgtggggggccgaggtcaaggtggaggcgcccgccgccgccgcc
gcaccaccctccaagtcgggggccgctgcttcttccaagagcgccggcagagtcaaagag
gaagaaggtaagagcaaagccaagaagatgaaattgacagtcaaaggaggtgctgccgtc
gatccggactcaggtctggagaacagtgctcacgttttggagcagaacggcaaaatgtac
agcgccacactgggcctggtggacatcatgcggggaaccaactcctactacaaactgcag
ctgctggaggacgacgtacagaaaaggtactgggtgttccgctcgtggggccgggtgggc
accaccatcgggggtaacaagctggacaaaatcggcgacaagaactcggcgctcaacaat
ttcctgtcggtgtacaaagaaaagacgggcaacgtatggggcgcctccaacttcaccaag
taccccaacaagttctacccgctggagatcgactacggacaggacgaggaagccgtgaag
aggctgacggccacggcgggaaccaagtccaagctggccaaacctatccaggatctgatc
aagcagatcttcgatgtggaaagcatgaagaaggccatggtggagtttgagattgacctc
cagaagatgccgctgggaaaactgagcaagagacaaattcagagcgcttacgctctcctc
actgaagtgcagcaggcggtgtcggacaacgcggccgagtcgcacgttttggatttgtcc
aatcgcttctacacgctgatcccgcacgactttggcatgaagaaaccgccgctgctcagc
aacctggactacattcaggctaaagttcagatgctggacaacctgttggacatcgaagtg
gcttacagtctgctgagaggaggagcgcaggacaaccagagcgaccccatcgatatcaac
tacgagaagctcaagaccgacattgaggtggtggacaaaggcacgccggaggctgacatc
attctgcagtatgttaagaacacgcacgcagccacgcacaacacgtacacgctggaagta
caagagattttcaaaatcaagcgcgagggagagcgccagcgcttccggccctttgaggag
cttcacaatcgccagctcctgtggcacggctcgcgcgccaccaactacgccggcatcctg
tcgcagggtcttcgtatcgcccccccggaagccccggtgacgggttacatgtttggcaaa
ggcgtgtattttgccgacatggtgtccaagagcgccaactactgtcacacctcgcagtcg
gaccccgtcggccttctgctgctcgccgaggtcgcactcggcaacatgcatgaactgaaa
aaggcctcccacatcacaaaactaccaaaaggcaaacacagcgttaaaggtttgggccga
accgctcccgagtcgaccgccaccgccactttagacggcgtggaagtacctctggggaaa
ggggtcaacaccaacatcgacgacaccagtctcctctacaacgaatacattgtgtacgac
gtagcccaaataaacctcaagtatctcctgaagattaagttcaactaccaaacatccttg
tggtga
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