Syngnathus scovelli (Gulf pipefish): 125989949
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Entry
125989949 CDS
T08785
Symbol
dtl
Name
(RefSeq) denticleless protein homolog isoform X1
KO
K11790
denticleless
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125989949 (dtl)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125989949 (dtl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_1st
MIOS_WD40
WDR54
Beta-prop_WDR35_TULP_N
TAF1C_beta-prop
Motif
Other DBs
NCBI-GeneID:
125989949
NCBI-ProteinID:
XP_049612416
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All DBs
Position
20:complement(3897715..3912885)
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AA seq
653 aa
AA seq
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MVFRSIIENRLGRQRQNALPTQTRTMYPLSSLLEGYQCVRNDEHVSYGSLGDSVPPFGLS
FSSAREIQDVLAVANEEGIVRIYNTEGRGDRLLKEWLAHENAVFDIAWVPGESQLVTAAG
DQMARLWDVKSGELLGGFRGHLCSLKSVAFTSEDKAVFCTGARDGNILVWDTRCSKKDGY
YKPVKQIQGAHNKAETNPPSKTKKRRLSVRGMAPSVDTQQSVTVVLFQDQHTLISSGAVD
GFVKMWDLRKNYTAHHHEPVALQTYPYAGSSMRMRLGYSGLVLDSTRSNVMCNCTDDNIY
MFNVSGIKTTPEAVFSGHQNSSFYIKSTISPNNQFLASGSSDNHTYIWKISDPTQPPMTL
QGHSEEVTSVAWCPTDFTKIASCSDDHTVRIWRLRREMGGEQSSVGEANLVGWARPKSPR
KLSNPTETTPAKEQRVESIGGLASPCLAYCAPSGAALPLSSSTTSPVHCQQAKAANYQRT
SIKSWLSPSQGSPSQKSPLLCKVLSPCPQSPTNCTSPLAPQAKRRLETVNGSTNECEGTK
LSECVSELYPVAKRCKGQSGIARPAQGDLPHTDNHIEEARESSIQSGKENYCPGVSDWLS
AMGQKMRGNSRSPRGPRSPSAAKKQAGKTSASPTLNSPQNMKKISSYFMRGTD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggtttttcgttcaattattgaaaatcgtctaggcagacaacggcagaatgcattacct
actcaaacccggaccatgtatcccctgagctcccttctggaaggctaccagtgtgttcgc
aatgatgaacatgtctcctatggcagccttggtgattcagtgcccccatttggactatcc
ttctcctctgcgagggagattcaggatgttctggctgtggcaaatgaagaaggcattgtt
aggatttacaacactgaggggcgaggagaccgacttctgaaagaatggctggctcacgag
aatgctgtctttgacatagcatgggtgcctggggagtctcaattggtgactgctgcaggc
gaccagatggccaggttgtgggatgtgaagtcaggcgagctgttaggtggtttcaggggc
cacctctgcagcctcaaatctgttgcattcacttcagaggacaaagctgtattctgtact
ggcgcaagagacgggaatattttggtgtgggataccagatgcagcaaaaaagatggttac
tacaaaccagtgaaacaaatccagggtgctcataacaaagcagagacaaaccctccatcg
aaaacaaagaaaagacgactcagtgttcgcggcatggctcccagtgtggacacccagcag
agtgtcactgtggtgttatttcaagatcagcacactctcatctcctcgggggcagttgat
gggtttgtgaagatgtgggacctgaggaaaaactacaccgcgcaccatcacgaacctgta
gccctgcagacgtacccgtatgccggctcttctatgcgtatgcgtctcggttattctggt
cttgtcctggactccacgaggtctaatgtcatgtgcaactgcactgatgacaacatttac
atgttcaatgtcagtggaatcaaaactacaccagaggctgtgttcagtggccaccaaaac
tcatctttttacatcaaatccacaattagtccaaataaccagtttttggccagtggctca
agtgataaccacacatacatatggaagatctctgatcctacgcagcctcccatgactctt
caaggccatagtgaggaagtgacatctgttgcatggtgcccaacagacttcactaagatc
gcttcctgctccgatgaccacactgtgcgcatctggcgcttacgtcgtgaaatgggcgga
gaacagtcatcagtgggagaggccaatcttgttggctgggcacgtccaaaaagtccacgc
aaactttcgaatcccactgagacaacacctgctaaggagcagagggttgagagcattgga
ggcctggcctctccgtgcctcgcctactgtgctcccagtggtgccgccttaccgctctcc
tccagcaccacctcacctgtccattgtcagcaagccaaagctgctaattatcagagaact
tccatcaagtcctggctctcccccagtcaaggatctccaagccaaaagagccctctgctg
tgtaaagttctgagtccgtgtcctcagagcccaacgaattgcacttctcctttggcaccg
caagccaaacgcaggctggagactgtcaacggctcaactaatgaatgtgagggcacaaaa
ctgagcgagtgtgtctccgaactctaccctgttgccaaaaggtgcaagggccagtctggt
atcgcccgcccagctcaaggggatctgccacacacagacaatcatattgaggaagcccga
gaatcatcaatacagtctggaaaggaaaactactgccctggggtgagcgactggctgtca
gcaatgggccaaaagatgagaggaaactctcgtagccctcgtggccctcgaagccccagt
gctgcaaagaaacaagcgggcaagacgtcagcatcaccaactttgaattcaccgcagaac
atgaaaaaaatctcctcctatttcatgagaggcacagactga
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