Syngnathus scovelli (Gulf pipefish): 125990033
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Entry
125990033 CDS
T08785
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125990033 (stxbp5a)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125990033 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
125990033 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_VPS8
Synaptobrevin
VPS8_N
WD40_like
Beta-prop_WDR35_TULP_N
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
125990033
NCBI-ProteinID:
XP_049612590
LinkDB
All DBs
Position
20:4546888..4592635
Genome browser
AA seq
1151 aa
AA seq
DB search
MKKFNIRKVLDGLKEASSSSSSSAASSSSSNPSVQVGLQENHLVQEQLQSEHFQLCKTVR
HGFPYQPSSMAFDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIQLQFLINEGAL
VSALADDTVHLWNLRQKRPAILHSLKFSKERITFCHLPFQSKWLYIGTERGNIHIVNVES
FMLSGYVIMWNKAIELSSKAHPGPVVHISDNPMDESKLIIGFESGIVVLWDLKSKKADYR
YTYDEAIHSVAWHHEGKQFVCSHSDGTLTIWNVRGQGKPIQTITPHGKQPKDGKKPEPCK
PILKVEYKTTRIGEPFIILSGGLSYDTAGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCET
PYPNDFQEPYAVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPADLI
PALYSVGSRQKRQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGTVKFWDASAIMLQVL
YKLKTAKVFDRSRSKEDKGGADASDEDPFAIQLMSWCAESRMLCVAGVSANIIVYRFSKL
EVTTEVVQLLEVRMQYEPNDVESPEGGGEHTSAHPTPGASPQTCGPPSHPSTSSNNSDGG
NTPWLKVRSTPLKQSAGYQVDLVVQLVWVSGEPPQQITSLALNSSYGLVVFGNINGVAVV
DYIQKTVVLNLGMLELYGSNDPYQRQPRSPRKSRQPSGGLCDINEGSATSEDRCKSPTSV
LMSNSNLQQFYNGGGKGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRS
SSVTSIDKEAKEAVLSFHFCESYARKGDGTPSPCLFLGTSLGAVLTLPLTLPPPGEQRQL
QPVFLAPTGVLIRLKGSMLRLAFLDSTGSILPPAYEPWFEPNVSADGEEREKVRKRRPVS
LSPSGSQDLNESHYAVMCSEKQAKVLLLPSQTCIYKHSITEASFVLRADVVQMSQGVCLA
CFCANGHIMTLSLPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEIQRITYSQ
DTCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGEEVAGRASRSLAQH
IPGPGGIEGMKGTASGVVGDLARARIALDERGQKLGELEERTAAMMASADSFSKHAHEMM
LKCKDKKWYQF
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgttggatggcttgaaagaggcgtcctcctcctcg
tcctcctccgccgcctcgtcgtcctcctctaacccgtcggtccaagtggggctgcaggag
aaccatctggtccaggagcagctccagtcggagcatttccagctctgtaagaccgtccgt
catggcttcccataccagccatcgtccatggcgttcgaccccgtgcagaagatcctggcc
atcggcactcaaagcggggcgctcagattgttcggtcgccccggcgtggagtgttactgc
caacacgagagtggggcggccgtcatccagctgcagtttctcatcaacgagggggcgcta
gtgagcgccctggctgatgacacagtgcacctgtggaacctgaggcagaagagaccggct
attctgcactcgctcaagttcagcaaagagaggataaccttctgccacttgcctttccag
agcaagtggctgtacattggcaccgaacgggggaacatccacatcgtcaacgtggagtcc
ttcatgctctcaggctacgtcatcatgtggaacaaagccattgaactgtcctccaaggct
caccctggaccagtcgttcacatcagtgacaaccccatggatgagagcaagctgataatt
ggattcgagtccgggatcgtggtcctgtgggatctcaaatcaaagaaggccgactatcgc
tacacttatgatgaggcgatccactcagttgcttggcatcacgagggcaagcagttcgtg
tgcagtcattcagacgggactctgaccatatggaatgtgagaggccagggcaagccgata
cagacaatcaccccacatggaaaacagcccaaggacggaaagaagccagagccttgtaaa
cccattctcaaagtggagtacaaaaccaccagaattggggaacctttcattatcctgtcc
ggcggtctgtcgtacgatacggcgggccggcggccgtgcctgacggtcatgcacggcaag
agcacggccgtcctggaaatggactaccccatcgtagacttcctcacactgtgcgagacg
ccgtaccccaacgactttcaggaaccttacgctgtggtggtccttctggagaaggactta
gtagtgattgaccttgcacaaaacggttaccccatcttcgagaacccctaccccctgacc
atccacgagtccccggtaacctgctgtgagtactttgccgactgccccgcggacctcata
ccagcactttactcggttggctcacgacagaagcgtcagggctacagcaaaaaggagtgg
cccatcagtggaggaaactggggtcaaggcacacaaagctacccagagatcatcatcact
gggcatgccgatggaacagtgaagttttgggatgcctctgcaataatgctccaggtgctc
tacaagctgaaaacggccaaagtgtttgaccggagccgctccaaagaggacaagggcggc
gccgatgcatccgacgaagaccctttcgccatccagctgatgtcgtggtgcgccgagagc
cgcatgctgtgcgtggctggcgtgtcagccaacatcatcgtctaccgcttcagcaaactg
gaggtcaccacggaggtcgttcagctactcgaggtgcgaatgcagtacgaaccgaacgat
gtggagtcccccgagggcgggggtgagcacacgtcggcgcaccccaccccaggcgcttcc
ccgcagacatgcgggccaccttcgcatccctccaccagcagcaacaactccgatggcggc
aacacgccctggctcaaggtgcggagtacaccactaaagcagtctgccggttaccaggtg
gatttggtagtccagttggtgtgggtgagcggggaacctcctcagcagattaccagcctg
gcgctcaattcctcctacggcctcgtggtgtttggcaacattaacggtgtcgcggtcgtg
gactatatccagaagacggtggtgttgaacctgggaatgctggagctgtacgggtccaac
gacccgtaccagagacaaccgcgctcacccagaaagtctcgacagccctctggaggactg
tgtgacatcaacgagggttcggccacatcagaggaccgctgcaaatctcccacttcagtg
ttgatgtcaaacagcaatctccagcagttctacaatggaggtggtaaaggagcaaagatg
tcacggaaattaagcttgcctactgagctaaagccagacttggtcctcttgtccgtatgc
ccgccgcggggtgccaacccactagaccaccgggacaattccttcagccgttcgcggtcc
tctagcgtcaccagcatcgacaaggaggccaaagaagctgtcctgtccttccatttctgc
gagagctacgcccgcaagggcgatggcaccccatcgccgtgcctgttcctgggcacatcg
ctgggcgccgtgctgactctgcccctcacgctgccacctcctggagagcagaggcaactg
cagcctgttttcctcgcacccacaggcgtgttgatccgactgaagggaagcatgttgcgg
ttggctttcctggactcgaccgggtccatcttgccccccgcgtacgagccttggttcgaa
cccaacgtctcggcggacggcgaagaacgggagaaggtccgcaagcgtcggcctgtgtcg
ctttcgccgtctggctcgcaggatcttaacgagagccactacgccgtgatgtgctcagag
aagcaggccaaggtcctgttgctgcccagccagacgtgcatctacaagcacagtatcacg
gaggcctcctttgttttacgcgcagacgtggtccagatgagccaaggcgtgtgtctggcc
tgcttctgcgctaacggccatatcatgaccctcagtctgccgggactgagacccctcatg
gatgtaaactatctgcctctaacggacatgaggatagccaggaccttctgcttcacaaac
ttgggtcaggccatgtacctttgctcccccactgaaatccagaggatcacgtacagccag
gacacctgtgagaacctacaggaaatgcttggtgaattatttacaccagtcgagacgccc
gaggcccccaacaggggcttcttcaaaggtctctttggtggcggagcgcagtcgctagat
agagaagagctatttggcgaagaagtcgctggacgagcttcccggagcctggcccagcac
atccccggccccggcggcatcgagggtatgaaggggacggcttccggcgtggtcggcgac
ctggcccgcgcccggatagcgctggacgagcgagggcagaagctaggcgagctggaggag
cggacggccgccatgatggctagcgccgactccttttccaagcacgcccatgagatgatg
ctgaagtgcaaagacaaaaaatggtaccagttctga
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