KEGG   Syngnathus scovelli (Gulf pipefish): 125990034
Entry
125990034         CDS       T08785                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b
  KO
K21944  period circadian protein 1
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sscv03400]
    125990034 (per1b)
DNA repair and recombination proteins [BR:sscv03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    125990034 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 125990034
NCBI-ProteinID: XP_049612596
LinkDB
Position
1:complement(27034373..27045258)
AA seq 1416 aa
MSYDITQSAASNNARGRGTRVADNDQETESEQLNAAKSAGDDVSDMAQGNRAGGGSSPSE
ASGDQREPNSDDMDGGLSSGNDSGERDTGSRGRQSTRSSHSSSNGKDSGMMETTESQKSS
NSQSLSPPSGSLAYSLLSTSSEHDPPSTSGCSSNQSARVQSQKELMKAIKELKLRLPSER
KSKGHSSTLNALKYALQCVRQVRANKEYYHQWSVEECHGCSLDLSAFTIEELDNITSEYT
LKNTDTFSMAVSFLSGKVVYVSPQGSSVLRCKPERLQGTMFSELLAPQDVSTFYSGTAPC
RLPLWASCMGSASPAMDCTQEKSMFCRISANRMQGGEMRYYPFRLTPYQLTIRDSDTSEP
QPCCLLIAERVHSGYEAPRIPTDKRIFTTSHTPSCLFQEVDERAVPLLGYLPQDLVGTPT
LLYIHPEDRPTMVAIHEKIFQFAGQPFEYAPLRMCARNGEYLTIDTSWSSFVNPWSRKVA
FIVGRHKVRTSPLNEDVFAAQGCEGRTSTPDIVQLSEKIHRLLVQPVHSAGSQGYSSLGS
SGSRGSRHSQPQHLGASAASSSDSNGPAMDDGAVVLRKPMTFQQICKDVHMVKTNGQQVF
IESRNRPAPRANPNTVATSSPRAINSEPVRGLIADMTEPLKDFLPAPLVQKESPPGYSYQ
QINCLDSIIRYLESCNIPNTVKRKCGSYSGTSASDEDKQQDAGGNVKGASVGRVGEPPPL
PPLTLAMKAESVASVTSQCSFSSTIVHVGDKKPPESDIVMEEAPSTPTHAAPNLSSGPPT
ISIPLPPPPPPPPPPPMAMPPQAAPPTQPERDSRPSGGGAALAGGGGRLGLTKEVLSAHT
QQEEQAFLDRFKDLSKLRVFDQTTSSTVRCQAPAANPLARGVRCSRDYPAAGGGSSHRRG
RGGKRPRHQESSEQQSSLGLTGIHQDPRSRAAAGPLNIGAPANSSSWPSVCSQPSIPAAP
FAPGMVPIYPVYPPFSQPLTAPDASRFPPAQMVPPMMALVLPNYMFPQMGAPISQQGAPP
LQFFNQNYNYPSTAQAPVPAPAAVCNLVSVPGTGAASRSSTPQSYTQTPADRESADSPLF
QSRCSSPLNLLQLEESSSNRLEAATVLAASQQTTPTVQGGTGGVQSSANQRSSDVNTKEN
ENGETNESNNDAMSTSSDLLDLLLQEDSRSGTGSAASGSGSSGTRSSGSGSGSNGCCSSG
TSGTSSSQGSHTSKYFGSIDSLENDHSRKQPAGGGSGDGGEEQFIKCVLQDPIWLLMANK
DDKVMMTYQLPIRDMDAVLREDREALRGMQKHQPRFTEDQKRELSQVHPWVRTGRLPRAI
NISGCSGCKSPTLVPHATPFDVEIHEMELCSVLNTQKEVKKNSLEAPEEKEDDDEEDEGD
EEEGKSRQALTADKHRATPEGAEEDNALPPQSDMSH
NT seq 4251 nt   +upstreamnt  +downstreamnt
atgagttatgacatcactcagtcagcggccagcaacaacgctcgtgggcgagggacaagg
gttgcagacaatgaccaggagactgagtccgagcagctaaacgccgcaaaaagcgccggt
gacgatgtttccgacatggcgcagggaaacagggccgggggcgggtcgtcccccagcgaa
gcatccggcgatcaaagggagcccaactctgacgacatggacggcggtctctccagcggg
aacgactccggcgaaagggacacgggttcccgcgggcgccagtccacacgcagctcgcac
agctcgtccaacggcaaggactcgggcatgatggaaaccacagagagccaaaagagctcc
aactcgcagagcctgtcgcctccgagcggctcgctagcttacagcctgctgtccaccagc
tccgagcacgacccgccctccacgtccggctgcagcagcaatcagtcggccagggtccaa
agccagaaggaactcatgaaggccatcaaggagctgaagctccgcttgccatccgagcgc
aagtccaagggccactccagcactctgaacgctcttaaatacgccctgcagtgtgtcaga
caagtccgagccaacaaggagtactatcaccaatggagtgtggaagagtgccacggttgt
agcctggacttgtctgccttcacaatcgaggagttggacaacatcacttcggaatacaca
ctaaagaacacggataccttctcaatggccgtgtccttcctgtccgggaaggtggtctac
gtgtcaccccagggatcgtcggtgctgcgctgcaagccagagcgtctccagggcaccatg
ttttccgaacttttggctccgcaggacgtcagcactttttatagtggcacggcgccttgc
cgtctacccctttgggcctcctgcatgggatcagcctcgcccgctatggactgcactcag
gagaagtccatgttctgcagaatcagcgccaaccggatgcagggcggcgagatgcgctac
tatcccttccgcctgacgccctatcagctcaccatccgagattcggatacttccgagccg
cagccctgttgcctgctcattgcggagagggtccactctggatacgaagcacctcggatc
cctacagacaagaggatcttcaccaccagtcacacccccagttgcctcttccaggaagtc
gacgagagggcggtaccgttgttgggatatctgccgcaggatttggtaggaaccccgacc
ttgctttacatccaccccgaagacagacccacgatggtggccatacacgagaagattttt
cagtttgccggccagccctttgagtacgcgccgttgaggatgtgcgcccgcaacggggaa
tacctcaccatcgacaccagctggtcttcttttgtcaacccttggagccgcaaggtggcc
ttcatcgtagggcgccacaaagtcagaacgagcccgctgaacgaggacgtgttcgccgcg
cagggctgcgagggccgcacctccacgcccgatatagtgcagctgagcgagaagatccac
cgtctgctggtgcagccggtgcacagcgccgggtctcagggttatagctcgctgggttcc
agcgggtcccggggctcgcggcattcgcagccgcagcatctcggcgcctcggccgcctcc
tccagcgacagcaacgggcccgccatggacgacggcgcggtcgtgttgcgtaagcctatg
acctttcagcagatctgcaaagacgttcacatggtcaagacaaacgggcagcaggttttc
atcgagtctcgaaacaggccggcccctcgagcaaatcccaacacagttgccacgagcagt
ccgagagccatcaacagtgaacccgttcgaggtctcatcgctgacatgacggaaccacta
aaagatttcctgcctgctccgctggtacagaaagagtccccgccgggatattcctaccaa
cagatcaactgtctcgacagtatcatcaggtacctggagagctgtaacattcctaatacg
gtcaaaaggaagtgcggctcctactcgggaacatcagcttccgatgaagacaagcagcag
gacgccggcgggaacgtcaaaggtgcgtcggttggccgggtcggcgaaccccctccgctg
cccccgttgacgttagccatgaaggcggagagcgtggcctccgtcacgtcccagtgtagc
ttcagtagcaccatcgtgcacgtgggagataagaagccgccggaatcagacattgtgatg
gaggaggccccgagcactccaacacacgcggctcctaacctctccagtgggccacctacc
atctccattcctcttcctccacctcctcctccaccccctcctcccccaatggctatgccc
cctcaagctgcgccgccaactcagccggagagggacagccggccctccgggggcggcgca
gcattggcaggtgggggcggccgtctgggtctgacaaaagaggtgctgtcggcgcacacg
cagcaggaggagcaggccttcctcgaccgattcaaagacctcagcaagctgcgtgttttc
gatcagaccacatcttccaccgtgcgctgccaagcgcccgccgccaaccctctggcgcga
ggagtgcgttgttctcgggactacccggccgcgggaggcggctccagtcacagacgtggc
cgtggcggaaagaggcccaggcaccaggaatcatctgagcagcaaagctctctggggctc
acggggatacaccaagatcccagaagcagagcggcagccgggcccctcaacatcggagcc
cccgcaaactcctcctcctggccatctgtttgctctcagcccagtattcccgctgctccg
tttgcacccggcatggttccgatatacccggtctacccgccgttctctcagcccttaacc
gcaccagatgcgtcacgtttcccccctgcccagatggtgccccccatgatggccttggtt
cttcccaactacatgttcccccaaatgggggcacccatttctcagcaaggcgccccgccc
ttgcagtttttcaatcaaaactataactaccccagcaccgctcaagccccggttccggcc
cccgcagcagtttgcaacctcgtgtccgtacctggcacgggcgcggcgtctcgtagcagc
actccccagtcctacacgcagaccccagccgatcgcgagagtgccgactcccccctcttc
cagtcccgatgctcctcccccctcaatttgctgcagctggaggagtcatcaagcaaccgg
ttagaggccgccaccgtgctggcggcttctcagcaaaccacgcccaccgtgcagggtggc
acgggcggtgtgcagagctcagccaatcagaggagctccgatgtcaacaccaaggaaaat
gagaacggggaaaccaatgaatccaacaacgacgccatgtcgacttccagcgatttgctg
gatctgctattgcaggaagactcgcgctcgggaacaggatccgccgcctctggatccgga
tcatctggcaccaggtcctcgggttctggctccggctccaacggatgctgctcctctggc
accagtggcaccagtagcagccagggcagccacaccagcaaatatttcggcagcatcgac
tcgttagagaacgaccactcccgcaagcagccagcagggggcggcagcggtgacggtggc
gaggaacagttcatcaaatgtgtcctgcaggaccccatctggctgctgatggccaacaaa
gacgacaaggtcatgatgacctaccagctgcccatcagggacatggacgcggtgctgcga
gaagatcgcgaagcgctgaggggcatgcagaaacaccagccccgtttcacggaagatcag
aagagggaattgagtcaggtgcacccgtgggtgcgcacgggacgcctccccagagccatc
aacatctccggctgctccggctgcaagtccccaacattggtcccccacgccacccccttc
gacgtggagatccacgagatggagctctgcagcgtgcttaacacgcaaaaggaggtcaag
aaaaactcgttagaagcgcccgaggagaaggaggacgacgacgaggaagatgagggggac
gaggaggaaggcaaaagccgccaagcgctgaccgcagataaacacagagcgacgccggag
ggggcggaagaggacaacgctctgccgccacagtctgacatgagtcactaa

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