Syngnathus scovelli (Gulf pipefish): 125990037
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Entry
125990037 CDS
T08785
Name
(RefSeq) F-box only protein 30-like
KO
K10307
F-box protein 30
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125990037
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125990037
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
zf-TRAF
DUF745
DUF4438
Motif
Other DBs
NCBI-GeneID:
125990037
NCBI-ProteinID:
XP_049612599
LinkDB
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Position
20:complement(4465239..4468718)
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AA seq
756 aa
AA seq
DB search
MTCLGREEEVEVPIRTVFILHKLPAQQHLFLSIRTHSVIKKKVLKMAEEHAHCMSCFNLR
CTVRPQPGISCELSGCTLACGVAFHSCKAEEHHLLCPLLRVPCLNSASGCPAAVARNQMS
AHLEVCPAGVVCCTMEWNRWPVSCTDYSSYECLSRGMGEAEQLDMALALQDQCTLLESLR
LIAIAPAIKRDSPDPASKLARVTALRSSELRTARERIAGGIKGLYVEQYPELYEASLETA
RSLASTLELLSSANSSDSHVEGVRAEATTLVSRLDQLVQLQNETMEETSSSTNGCLEDLV
ASQTSLHKVAQSKRANLLCGADSVVGVEATWHSSRLDGPMQFQNGRTTNESIEKEMSLLI
NECLEDLVAQEVATPPLRPQVALQDRGLVLEYHNPEDQMLPCGQSHMETKTEDKAADTSD
LEQEDDPTGLGEMDLITAALIFCLEESREDRRISGTLHLEGGRVHSGTQTFPFPAAVLVT
NTRVGDMASASACDHASPQISCPSPFHVLRLGLVQEPLEAIPSNYSVPGNARYQHMFPFV
CAQSFRRDEFSSHFTNVHGDIHAGLNGWMEHRCPLAFYGCTFSQRRFYPTSPGARVVHDR
LLRSFGVQPHLGAKLSVDSQSDQFSKLPLEILSHIAGFLDGFSLCQLSLVSHTMREVCSG
LLHTRGIVELQWESRQRSAGHKSSSWQVKHKVWRFSTAFSPVLSWGFADIPSMSNHLKKC
RYNTVVNRTEPVPLPAMGLLQEHMTNLRKYRWSEHY
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacctgcctgggtcgtgaggaggaagtggaggtaccgatacgtaccgtgttcatcctt
cataaactacccgcacagcagcatttattcttgtctattcgaacgcacagtgttataaag
aaaaaggtcctcaaaatggctgaggagcacgctcactgcatgtcctgtttcaacctcaga
tgcacggtcagacctcagccaggcatttcttgcgaactcagcggctgcactttagcatgc
ggcgtggcctttcactcgtgcaaagccgaggagcaccacctcctgtgcccgctgctgagg
gtgccgtgcctgaacagcgcatccggctgccctgctgccgtggcgcgcaaccagatgtcg
gcgcatttggaggtgtgtccggccggggtggtctgctgcaccatggagtggaaccgctgg
ccggtcagctgcacggactactcttcgtacgagtgcttgagtcgcggcatgggtgaagcg
gagcagctcgacatggccctcgccctccaggaccagtgtactctactggagtcgctcagg
ttgattgccattgcacccgctatcaagagggactcccccgaccctgcgagtaagctcgcc
agggtgacggctctgcgatcgtctgagttgcgaacggcgagggagcggattgccggcggt
attaagggactgtacgtggagcagtaccctgaattgtacgaggcctctctggagacggcg
aggagcttagccagcactttggagctgcttagcagtgcaaactcatctgatagccatgtt
gaaggtgtgagagcagaagcaacgacgctggtgagcagattggaccaactagtgcagctt
caaaatgagactatggaagaaactagttcatcaacaaatggctgcttggaggacttggtt
gcttctcagacttctttgcacaaggtggcacagagtaagagagccaacctactttgtggt
gctgactcagttgtaggagtagaagccacttggcattccagcagactcgacggaccgatg
cagtttcagaacggacgaaccacaaacgaatctatagaaaaagaaatgagcttgttaatc
aatgaatgtctggaggacttggttgctcaggaggtggccacgccccctttgaggcctcag
gtggcgctacaagatagagggctggttctagaataccacaacccagaagatcagatgctc
ccctgtggccagagtcacatggagaccaagaccgaggacaaagcggcggacacctcggat
ctggaacaggaggacgatcccacgggacttggagaaatggacttgatcacagccgccttg
atcttctgcctggaggagtccagagaggacagaaggatctcaggtacgttgcacctggaa
ggcggtcgggtccactcgggcactcagacgttcccgttcccggcggccgtgctggtcacc
aacacgagggtcggcgatatggcctcggcgtccgcctgcgaccacgcctccccgcaaatc
tcctgccccagcccctttcatgtcctccgcctgggcctcgttcaagaacccctggaggcc
atcccgagcaactactcggtcccaggcaacgcccgctaccaacacatgttccccttcgtg
tgcgctcagtccttccgccgcgatgagttttcttcgcacttcaccaacgtccacggcgac
attcacgctgggcttaacggctggatggagcaccgttgcccgctggctttttacggctgc
accttctcccagcggaggttctaccctacatccccgggggccagggtggtccatgacagg
ctattgaggtccttcggggtgcagcctcatctcggggccaaactctcggtcgattcccag
tcggaccagttcagtaaactacccttggagatactgtcgcacatagctggcttcctggat
ggcttcagcctgtgccaactgtctttggtgtcgcacaccatgagggaggtgtgctccggt
ctactccacaccagaggtatcgtggaactgcagtgggagagcaggcaacgctctgccggt
cacaagagttcgtcgtggcaggttaaacacaaagtgtggcggttcagcacggcgttcagc
ccagttctgtcatggggcttcgcagacatccccagcatgtcaaaccacctgaagaagtgc
cggtacaacacggtggtgaaccggaccgagccagtgcctctccccgccatgggcctgttg
caggagcacatgaccaacctccgaaaatatcggtggtcagaacattattag
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