Syngnathus scovelli (Gulf pipefish): 125990090
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Entry
125990090 CDS
T08785
Symbol
elp3
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125990090 (elp3)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
125990090 (elp3)
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
125990090 (elp3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-GeneID:
125990090
NCBI-ProteinID:
XP_049612775
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Position
20:7415976..7426131
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AA seq
550 aa
AA seq
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MGKPKKKSAFSRAELMMMTIADVIKQLVEAHEEGKDINLNKLKTKTAAKYGLEAQPRLVD
IIAAVPPQHRRALVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSD
FEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHTVDKVEFIVMGGTFMALPE
EYRDYFIRNLHDALSGHTSNNVAEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLGYG
CTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHLAKDAGFKVVAHMMPDLPNVGIERDVE
QFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTGRYKSYTPSTLVDLVARILALVPPW
TRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDMGTECRDVRTREVGIQEIHHKVRPYQ
VELVRRDYVANGSWETFLSYEDPEQDILIGLLRLRRCSPQSFRAELKGGVSIVRELHVYG
SVVPVSSRDPSKFQHQGFGMMLMEEAEKIATYEHGSNKLAVISGVGTRNYYRKMGYELEG
PYMVKLLHEL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaccaaagaaaaagagtgccttcagtcgagctgaactgatgatgatgaccatc
gccgatgtcatcaaacagttggttgaagcacacgaagagggaaaagacatcaaccttaac
aaattgaaaacaaagaccgctgcgaaatatggcctggaggctcaaccccgtttggtcgat
attatagctgccgttcctccacaacatcgccgtgctctggtacccaaactaaaggccaaa
ccgatccgcacagctagtgggattgcagttgttgctgtgatgtgcaaaccacatcgttgt
ccacacatcagcttcactggcaacatttgtgtgtactgccctggtgggccggactcagac
tttgaatactccacacaatcttacactggttatgagcccacctcaatgagagccattcga
gcgcgatatgatccctaccttcagaccaggcatcgtgtggagcagctaaagcaactgggc
cacactgtggataaagtggaattcattgtgatgggtggaacatttatggctctgcctgaa
gagtacagagattacttcatcaggaatcttcacgacgctttgtctggacatacttcgaac
aatgtggccgaggctgtaaggtactctgagcgcagtaacaccaagtgtgtaggaatcact
attgagacgcgtcccgactactgcctgaaacgacacctgagcgacatgttgggctacggc
tgcacaagactggagatcggtgtccagagtgtgtatgaagatgtggccagggatacaaac
aggggccacacagttcgagctgtatgtgagtctttccacctggcaaaagacgccggcttc
aaagttgtggcccacatgatgccggacctgcccaatgtcggcatagagagagatgtggag
cagttcattgagttttttgagaatccagcattcaggcccgatggattaaagctatacccg
actttggttattcggggtacgggcctatatgagctgtggaagacgggccgctataagagc
tacacacccagcaccctggtggacctggtggcccgaatccttgcactggtgccgccctgg
acacgggtttatcgcgtgcagagggacatcccaatgccattggtgagctccggagtggag
cacggaaacctacgggagttggccttagccagaatgaaggatatgggcactgagtgtcga
gatgttagaaccagagaagtgggaattcaggagatccaccacaaagttcgaccctaccag
gtggagctagtgcgaagggactacgtagccaacggtagctgggagaccttcctctcttat
gaggatcccgagcaggacattctaattggactgctgcgtctacgccggtgctccccgcag
tcgttccgggcggaactgaaagggggcgtgtccatcgtccgcgaactacacgtgtacggt
agcgtggtcccggtcagtagccgagaccccagcaaattccaacatcagggattcgggatg
atgttgatggaagaagcggagaaaattgccacgtatgaacatggctccaataaattggcg
gtcatttcaggtgtaggaacaagaaactactacaggaagatgggctatgaattggaagga
ccatatatggtgaagcttctacatgaactataa
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