Syngnathus scovelli (Gulf pipefish): 125990202
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Entry
125990202 CDS
T08785
Symbol
tulp4a
Name
(RefSeq) tubby-related protein 4a isoform X1
KO
K24720
tubby-related protein 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125990202 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Other domain-containing proteins
Tubby family proteins
125990202 (tulp4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
PAT1
WDR55
Beta-prop_CAF1B_HIR1
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
125990202
NCBI-ProteinID:
XP_049613047
LinkDB
All DBs
Position
20:5213229..5226089
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AA seq
1771 aa
AA seq
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MFASVEHGSVLCSDSNILCLSWKGRVPKSEKEKPVCRKRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRPTPQRVNFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPNFLVEDSSESDTDSDDYPPQ
QVRSHKPLLTVSFTSGDISLMNNYDDLSPTLIRTGLKDVVVQWCSQGNLLSVAGMEKTLL
SHDPSCTSPTRNAMVKFYNVRGEHIYTLETPAQRPITTLCWGHRDSRLFLACGPALYVVR
VEHRIANLQLLCQQVIATAVKEEKDVAKLTMPSRLCSYVTSAFIPTIRQPIPDPNKMLDF
VSYPTAGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KTDGKTDEIYGNSLISAMIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSPKLPRDLVCP
FTNRINIDPRKSPKLSRTAQEVSRSPRLPIRKPSIGSPSLTRREFPLDDITQQNYLAQVT
SNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMEYINLPVFSP
NVFSEDEDDLPVSGPAGGTDDNPPCTVNIPIAPIHSPAQAMSPAQSIGLVQSLLANQNVQ
LDVLSNPTATSPGAAASASATSDQSQDAALTAHYTVPTRYSSPGQVIFGGLDMSRLTVGA
SQSHHQQQQLHQLQQQQHQQQLQQQQQQQMLQQQQQHQQLLQQQQQQLQQQLQQMQQQQQ
QQKLQQQQMLQMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQLHIQIPVSSMSSAQTSVLPTGALQIQIPHPPPDLVERGAAGEHETLLKIKTT
RSGPQLAEADTVVFSAPLELSKMNPPPPYPGTVPSSMSASGVPSNALSGTIGNSPGTPPP
GDLSAKKADIQLYPPSQHQGQYPTPLGYERITTFDSSGNVEEVCRPRTRLVCNQNVYSLQ
GPGSSATLRVTSSASSSAEGKKIQLPYSSATLNRLTAPRYSIPSGDPPPYPDPANQSSGR
NPGQKLDSSLIHATLRRNSREATLKVSQMMEPPRPLPPKTKNNSALAASYQQRVQTALYT
CSQCSSGSSVGVTAPGSANGIAGGTIIRQDFPPGNGAPHSTVIVHSNSGTPLGSQSSYSL
LSSLEGPGPTALGASSGRERVDYVNSAFTEDETLNQSLRHLALGGNDASGLLFKRPPPYQ
WDPAATEEVWVPQERGAMLNPAGHPLPHKPPPLILSPAQHLDVSRLPYMLSPRSPTTPGA
GSFQAGYQISLQYPQVAAYPAVLTSPRPCSSSKEVGGPVSLSQQDATIVLPAGYPANLTN
LACCPLPPMYPGSGLAIPPIALHTPWGTYNSCPPSTSPAVPLPPKASHMTVDKNALSPPP
LPPPPPPPPPPPPPPPSHAELQNHAGLQDGMAETGDGFQEVLSLAESPVPPRSDKFSKKN
RKRADGRAEEANVPQLAEGSKSKKEGRALGDFNALISSPRLGGRDKKKVKGPKEQLKAKK
LSKATANSEFQDSSDSEPELFISGDELLNQCQSGKKGWKTKRNLRAASELEEMRCRKANE
KEDRGLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRI
DGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcctcagtggagcacggctcggtcctctgcagcgactccaacatcctgtgcctg
tcctggaaaggccgcgtgcccaagagcgagaaagagaagccggtgtgccggaaacgctac
tacgaggagggctggctggccactgggaacggccgaggcgtcgtaggcgtcacttttaca
tccagtcactgcaggcgggaccggccgacccctcagagggtcaacttcaacctcagaggg
cacaacagtgaggtggtcctggtgcgatggaacgagcccttccagaaactggccacctgc
gacaccgacggcggcatctttgtttggatccaatacgagggccgctggtcggtagagctg
gtcaacgaccgcggagctcaggtgagcgatttcacgtggtcgcacgacggcactcaggcg
ctcatctcctatcgcgacggctttgtcctggtggggtccgtcagcgggcagagacactgg
tcatccgagatcaaccttgagagtcagatcacgtgcgggatttggacgcccgacgaccag
caggttttgtttggcaccgccgacggccaggtgatcgtgatggactgccacgggcgcatg
ctagcccacatcctgctgcacgagtcggacggcatcgtcagcatgtcgtggaactacccg
aatttcctggtggaggacagcagcgagagcgacacagattccgacgactacccgccgcag
caagtgcgcagccacaaacctctgctcacagttagcttcacatctggagacattagcctg
atgaacaactacgatgacctctcgcccaccctcatccgcactggcctgaaagatgtggtc
gtccagtggtgctcgcaggggaaccttctgtcggtggccggcatggagaagacgctcctc
tctcacgacccctcttgtacttctcctacgaggaacgccatggtcaagttctataatgtc
cggggtgaacacatctacacactggaaacaccagcgcagcgccccatcaccacgctctgc
tggggtcaccgggacagccgcctcttcctggcgtgcgggccggcgctctacgtggtgcgg
gtggagcaccgcattgccaacctgcagctgctctgccagcaggtcatcgccacggccgtg
aaggaggagaaagacgtggctaagctcaccatgccgtcacgtctctgctcctacgtcact
tccgctttcatccccaccatcaggcagcccattccggaccccaacaaaatgctcgacttt
gtgagctacccaacagctggcaatgagcgtctgcattgcacaatgaagcgcacggaggac
aacccagaagtgggcgggccctgctacactttgtacttggagtacttaggcggtctggtg
cccatcttaaaaggtcgacgcatcagtaaattgcggccggagtttgtcattatggatccc
aagacggatggaaaaacagatgaaatatatggcaacagcctgatatcagcgatgattgac
agctgcaactgctccgactccagcgacattgagctcagcgacgactgggtcggcaagaag
tctccaaagatatcccggggcagtaagtcccccaagcttcccagagacttagtttgtccc
tttaccaacagaatcaacatcgatcccaggaaatcgcctaaactctctcgcaccgcccag
gaagtttccagatcaccacgtctacccatacgcaaaccctccattggctcgcccagtcta
acgcggagagaattccctttagatgacatcactcagcaaaactaccttgctcaggtcaca
tcaaatatttggggaacaaaattcaagattgtgggcctcgctgcatttctaccaacaaac
ctcggtgcagtcatctacaaaaccagcctcctccacctgcagcccagacagatgacaatt
tacctgccggaggtgcgcaagatctccatggagtacatcaacctgcccgtcttcagcccc
aacgtcttcagtgaggacgaagacgacttgcccgtgtcgggccccgctgggggcacagac
gacaacccgccctgcacggtcaacattcccattgcccctatccacagtcccgcccaggcc
atgtcccccgcccagagtatcggcctggtccagtccctgcttgccaatcaaaatgttcag
ctggatgttctaagcaaccccacggccacttctcctggagctgctgcttctgcttctgct
acttccgaccaaagccaagatgccgcgcttacagcccactacacggtcccaaccagatac
tccagtcctggtcaggtcatctttggagggctagacatgagtcgcctcactgtcggagcc
tcgcagtctcatcatcagcagcagcagttacatcagctccaacaacagcagcaccaacaa
cagctccagcagcaacagcagcagcagatgctgcagcaacagcagcaacatcaacaacta
cttcagcaacaacagcagcagcttcagcagcagctccaacagatgcaacagcagcagcag
caacaaaaactacagcagcaacaaatgcttcagatgcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcttcacattcaaatccccgtttcctccatgtcgtca
gcacagacctcagtgcttccgacgggggcgctgcagatccagatccctcacccgccacct
gatctcgttgaaagaggagctgcgggtgaacatgagaccctgctgaaaataaagaccacg
cgttcgggtccgcagctggccgaagccgacacggtggtgttcagcgcgccgctggagctg
agtaaaatgaatccccctcctccttatcctggaactgtgccctcttctatgtcggcctcc
ggcgtgccctcaaacgccttatcgggaacaattgggaactcccctggaacgccaccgcct
ggtgatctgagtgcaaagaaagcagatatccaactttatcccccgagtcagcaccaaggc
cagtaccccacaccgctaggctacgagcgaatcaccacctttgacagcagcggtaacgtg
gaagaagtctgtcgtcctcgaacccgtctcgtctgcaatcaaaatgtctacagcttgcaa
gggccgggaagctccgccaccctcagggtcacctcctctgcatcctcctcggcagaaggc
aagaagatccagctgccctacagctccgccacactcaacagacttaccgcacctcgctat
tccataccgagcggagaccctcccccgtatccggacccggccaatcagagtagcggcagg
aatcctggacaaaagctggatagcagtctcatccacgccactctcaggaggaacagccga
gaggccactctcaaagtgtcccaaatgatggagccgcccagaccgctgccgccaaaaact
aaaaataacagtgcactggcggcctcctaccagcagagagtgcaaactgccttatacacc
tgcagtcagtgtagcagcgggtccagcgttggagtcacggctccgggcagcgccaatggg
atagcggggggcaccatcatcaggcaagattttcctcctgggaacggtgcgccgcacagc
acagtcatcgtacactccaacagcggcacccctctgggctcgcagtcctcttacagcctg
ctcagctcactggaaggacccggacctacagcgctgggagcgagcagtggccgagagcgc
gtcgattatgttaattcagcgtttaccgaggacgaaacgctcaatcagtccctcaggcat
ttggctttgggaggaaatgatgcgtcaggcttgctgtttaaacgcccgcctccctatcag
tgggaccccgccgccacggaggaggtgtgggtccctcaggaacggggtgccatgctcaac
cccgccggccatccactaccacacaagccgccgccgcttattctcagcccagctcagcac
ttggacgtgtccaggctgccttacatgctgtctcccaggtcgcccaccacccccggcgcc
gggtcctttcaagccggctaccagatttctctccagtatccccaagttgctgcctacccc
gcagtgctcacgtcacctagaccctgttcctcctcaaaagaggtgggtggccccgtgtct
ctctcacagcaggatgccaccattgtcctacctgccggttaccccgccaatctaaccaac
ctggcctgttgccctctaccacctatgtaccctggttccgggctcgccattccccccatc
gccctccacacaccttggggtacgtacaactcgtgccccccttctaccagtcctgctgtg
cccctaccgcccaaagcttcccatatgacggtagacaaaaatgctctctcaccaccaccg
ctgcctccgcctcctccacctcctccaccaccaccacccccgccaccatcacacgcggaa
ctgcagaaccacgcggggctacaagacggcatggcagaaaccggggacggtttccaggaa
gtgttgtctttagccgagagccctgtgccacctcgttcggacaagttcagcaagaagaac
cgcaagagggcggatgggagggcggaggaggccaacgtgccgcaactggctgaagggagc
aagtccaaaaaggagggcagggcactgggggacttcaacgccctcatctccagcccacgg
ctgggagggagggacaagaaaaaggtgaaaggaccaaaggagcagctaaaggccaagaag
ctgagcaaggccaccgccaacagcgagttccaggacagctcggatagcgagccagagctt
ttcatcagcggggacgagctcctcaaccagtgccagagcgggaaaaaaggctggaagacc
aagaggaacctcagggcggccagcgaactggaggagatgaggtgtcgcaaggccaatgag
aaggaggaccgagggctgggcagccagggcttcgtgtacgtcatggccaacaaacagcct
ctgtggaatgaagccacgcaggtctaccagttggactttggcggtcgcgtcacgcaggaa
tccgccaagaattttcagattgaactcgagggcaggcaggtgatgcaattcggccgcatc
gacggcaatgcctacatcctggactttcagtatcccttctccgccgtgcaggccttcgcg
gtggctttggccaatgttacgcaacgcctcaaatga
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