Syngnathus scovelli (Gulf pipefish): 125990204
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Entry
125990204 CDS
T08785
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125990204
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125990204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
125990204
NCBI-ProteinID:
XP_049613054
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All DBs
Position
20:5204638..5209269
Genome browser
AA seq
723 aa
AA seq
DB search
MGVHDLWSIVEPVRESVPLYSLSGKRLAVDLSLWVCEAQHVQAMMGRVAKPHLRNLFFRV
SSLILMGVKLVFVMEGQAPKLKAVTMSQRTANRYGGNQKGSKSSTSTSRGHFDAVLRECA
EMLDYLGMPWVVAAGEAEAMCAYLDSCGLVDGCITNDGDVFLYGARTVYRNFNMNSKDPQ
VDCYKTSRVHAELCLSRENLVGLAILLGCDYIPKGVQGVGKEQALKLIQTIKGQTLLQRF
MRWKNEAGCLSQAVVKKLPHCHICRHPGSAKGHERSGCVLCDSQQFCQPQDFDYQCPCDW
HHLERARQAKSLEANIKKKTLASPQFPFTEIINEFLLTKDKPVENFKRRQPNMLSMQKFA
LDKMEWPKHYTSEKVLALMTYTELMNRKCGWMMSSQIKPIRIFKQRVRNSISCFEVIWST
PDHYVFPVDRPAEDQREVRSVEEENLFRAAFPEVVENYLRDKALAEENKTKKRKPKSKKE
KMAENPDGVSELLAQMTLQNAPPEKALPTSPQTLLSETPVRHKQHQQLTENGSQADSSAA
AIDALHLSDIDWDALSFTATPPPQAAPECPDRFSNQLSLLVPILKSPHNDGSGIKKTCEV
IPKVDKKPLHPYKFVRSASTKVQRCHSQPCPVNKIKKSVCVSVCSSSEDSDEENRLPRRT
TKSKQSLQSGDYVTRAPSKIQADINDSPPAPASPIVVLDSDDSVVCGDSPLPLAERLRLK
FLK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtacatgacttgtggtctattgtcgagcccgtgagagagtcggtacccctgtac
agtttgtccggtaagaggctggcggtggacctaagtttgtgggtttgcgaggcccagcac
gtccaagcaatgatgggcagagttgcgaagccccatttgaggaatttatttttccgggtg
tcgtccctcattcttatgggggtgaagctggtgttcgtcatggaagggcaggcccctaaa
ctgaaagcagtgaccatgagccagaggactgcaaatcgatatggagggaaccaaaaaggg
tctaaatcctcaacgtccaccagcagagggcactttgatgcagtccttagagagtgtgca
gagatgcttgactacctgggaatgccatgggtggttgccgcaggggaggcggaagccatg
tgtgcatacctggactcatgtggtcttgtggatggttgcatcaccaatgatggagatgtg
ttcttgtacggagcacgaaccgtctacagaaacttcaatatgaactccaaggacccccag
gtggactgctataagacttcccgtgtccatgcagagctatgcctgtcgagggagaatctt
gtcggtctggcaatcctccttggatgtgattacattcccaagggagtccaaggtgtcggt
aaagaacaagctctcaagctgatccagaccatcaaaggccaaacgcttctgcagaggttc
atgcggtggaagaacgaggcggggtgcctgtctcaggcagtcgtgaagaagcttccccac
tgccacatatgtcgacatccaggctcagccaaaggtcacgaacgcagcggctgtgtcctt
tgcgacagtcagcaattctgtcaacctcaagattttgactaccagtgtccatgtgattgg
catcacttagaacgggcccgccaggccaagtcccttgaggcaaatatcaaaaagaaaaca
ctggcgagtccacagttcccgtttacagagattatcaacgagtttctgctaaccaaggac
aagcctgttgaaaacttcaaaaggaggcagccgaatatgctctcaatgcagaaatttgct
cttgacaagatggagtggccaaagcactacacgagtgagaaggttttagctctgatgacc
tatacagagctgatgaacagaaagtgtggctggatgatgtcatcgcaaatcaagcccatc
aggatctttaaacaacgcgtgaggaattcaatttcctgcttcgaagtcatctggagcaca
ccagatcattacgtgtttcctgtggatcggcccgccgaggatcagcgtgaggtgaggtcg
gtggaggaggagaacctcttccgtgcggccttcccggaggtggtggagaactacctgagg
gacaaagcattggctgaagagaacaagaccaaaaagcggaaaccaaagagtaaaaaggag
aagatggccgaaaatcccgatggtgtttcggagcttctagcacagatgacccttcagaac
gcccctccagaaaaggcccttccaacctcgccgcaaacgttgctttcggaaacgcccgtg
cgccataaacagcatcaacaactcactgagaacggctctcaggcggattcctcagcagcc
gccatcgacgcgctccatcttagcgacattgactgggacgcgttgtccttcacggccacc
ccgccgcctcaagcggctcccgagtgcccagataggttctccaatcaactaagcctcctt
gtaccaattttaaaatcccctcataacgacggcagtggtatcaaaaaaacatgtgaagtc
attccaaaggtggacaaaaaacctcttcacccatacaaatttgtcagatcagcatccaca
aaagtgcagaggtgccactcgcagccatgtccggtgaacaaaatcaagaagagcgtgtgc
gtgagtgtttgttcatccagcgaggatagcgatgaggagaaccggctgcctcgcagaacc
accaagagcaagcaaagtctgcaaagtggagattatgtcacaagagcaccaagcaaaatc
caggccgatatcaatgattcccctcccgccccggcgtcccccatcgttgtgttagatagt
gacgattcggtcgtttgcggggacagccctttaccgctggcagagagactcaggctcaag
ttccttaagtaa
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