KEGG   Syngnathus scovelli (Gulf pipefish): 125990226
Entry
125990226         CDS       T08785                                 
Name
(RefSeq) protein PALS1
  KO
K06091  MAGUK p55 subfamily member 5
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04530  Tight junction
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    125990226
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:sscv04990]
    125990226
Domain-containing proteins not elsewhere classified [BR:sscv04990]
 PDZ domain-containing proteins
  MAGUK family proteins
   125990226
SSDB
Motif
Pfam: Guanylate_kin L27_N PDZ SH3_2 PDZ_6 SH3_1 L27 PDZ_2 SH3_9 ZNHIT3_C
Other DBs
NCBI-GeneID: 125990226
NCBI-ProteinID: XP_049613088
LinkDB
Position
20:3599149..3605936
AA seq 644 aa
MITTHMNGYVQEGTAQAASHRERAVDCPGDESCLVKPVHCSAQMERIQHCQDELRKRREE
DGRGKHDIDPNASLRLRKLAQNPKVGVDNPTFEGKEHTTKDAITDLEELLQAIKWVQQYL
SDARSHQDAELLIQLLANDDFKCAYSIYTVVSQKMNRVNPTSPLTAQAQELCLEVQKILQ
SSQQKEGLELRALLINPHLQALMQAHDSLAVQEMAEDNVIQYLGETVKMVRLHKTRDTPL
GATVRNDMDSVMVSRVVKGGTAEHSGLLNEGDEILEINGISLRGKHVNEVHDLLQQMHGT
LTFLLIPSSQIKSAPHRQTVMHVRAYFDYDPSDDPFVPCRELGLSFQKGDILHVISQDDP
NWWQAYRDGDEENQLLAGLIPGKCFQQQRETLKRTTPDRSREQQGKRWYVKKNKQQKKKS
TSPCRNAESEDVLTYEEMSLYHQPANRKRPIALIAPTNSGHDELRRRLLVVEPNKFAVAV
PHTTRSARIHERNGREYHFVNRQSFEDDLSAGKFIESGEYGKNLYGTSTDSVRHVVNSGR
ICLLCLHTRSLKVLRSSNLKPFVIFIAPPSQERLRTLLATEGKTPKPEDLKEVIEKAREM
EQDFGHVFDATIVNAEPNEAFFELRRLIEKLDTEPQWVPTSWLC
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgatcacgacccacatgaacggttatgtgcaggaaggcaccgcccaggccgccagccac
agggagcgggcagtggactgccctggcgacgagagttgcctcgtcaagcccgtgcactgc
agtgcccagatggagagaatccaacactgccaggatgagctgaggaagaggagggaagag
gatggccgggggaagcacgacattgaccccaatgcatcactgaggctcaggaaactggca
cagaatccaaaagtgggcgttgacaatcctacctttgaggggaaggagcataccaccaaa
gatgcaattaccgacctggaggagctgctgcaagccatcaagtgggtgcagcaataccta
agtgacgctcggagccaccaggatgcggagctgctcatccagctgcttgccaatgatgac
tttaagtgcgcctacagcatctacaccgttgtgtcccaaaagatgaatcgagtcaacccc
acctcgcccctcacggcgcaagcgcaggagctatgcctagaggtccagaagatcctccag
tccagccaacagaaagagggcttggagctcagggctctgctcatcaatcctcatctccag
gcgctgatgcaagcacatgacagcttagctgtgcaggaaatggcagaggacaacgtgatc
cagtatttgggcgaaactgttaaaatggtgcggctgcataagactcgtgacactccgctg
ggcgcgaccgtgcgtaatgacatggacagtgtgatggtgagccgggtagtgaaaggcggg
actgcggagcacagcggcctgctcaatgagggggatgagatcctggagatcaacggcatt
tcccttcgtgggaagcacgtcaatgaagttcacgacttactgcaacaaatgcacggcact
ttgacattccttctcatcccgagctctcagattaaatctgccccacacagacagactgtg
atgcacgtacgagcttactttgactacgacccctcagatgacccttttgtgccatgtcgg
gagctgggcctttctttccagaaaggggacattcttcacgtcatcagccaggatgacccc
aactggtggcaggcttacagggacggagatgaagaaaatcagttactggctggactcatt
ccagggaaatgcttccagcaacagagagagaccttgaagagaacaacaccagacaggagt
cgagagcagcaagggaagcgctggtatgtgaagaaaaacaagcagcagaagaagaaaagc
acatctccatgcagaaacgctgaaagcgaagacgtcctgacgtatgaggagatgtctctc
tatcaccagcccgccaaccgcaaacgccccatagctctgatcgctcctacaaacagcggc
catgacgagctgcgccgcaggctactcgttgtcgagccaaacaagtttgccgtcgccgtc
ccacacacgaccagaagtgcgaggatccacgagcggaacgggcgcgagtaccactttgtg
aatcgacaaagcttcgaggacgacttgtcagcagggaagttcatcgagtccggggagtac
gggaagaacctgtatggaaccagcacggactctgtgcgacacgtggtcaactctgggcgc
atctgcttgctctgcctgcacaccaggtcgttgaaggtcctgaggtcctccaacctcaaa
ccgtttgtaatcttcattgcacctccttctcaagaacgactgcgcaccctgctggctact
gagggaaaaacacccaagccagaagatcttaaggaggttatcgagaaggctcgcgagatg
gagcaggacttcggccacgtttttgacgccaccattgtgaacgcggagccaaacgaggct
ttctttgaactgcgcaggctcatcgagaagctggacaccgaaccgcagtgggtgcccacc
tcttggctctgctga

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