Syngnathus scovelli (Gulf pipefish): 125990226
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Entry
125990226 CDS
T08785
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125990226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125990226
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
PDZ domain-containing proteins
MAGUK family proteins
125990226
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
SH3_1
L27
PDZ_2
SH3_9
ZNHIT3_C
Motif
Other DBs
NCBI-GeneID:
125990226
NCBI-ProteinID:
XP_049613088
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All DBs
Position
20:3599149..3605936
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AA seq
644 aa
AA seq
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MITTHMNGYVQEGTAQAASHRERAVDCPGDESCLVKPVHCSAQMERIQHCQDELRKRREE
DGRGKHDIDPNASLRLRKLAQNPKVGVDNPTFEGKEHTTKDAITDLEELLQAIKWVQQYL
SDARSHQDAELLIQLLANDDFKCAYSIYTVVSQKMNRVNPTSPLTAQAQELCLEVQKILQ
SSQQKEGLELRALLINPHLQALMQAHDSLAVQEMAEDNVIQYLGETVKMVRLHKTRDTPL
GATVRNDMDSVMVSRVVKGGTAEHSGLLNEGDEILEINGISLRGKHVNEVHDLLQQMHGT
LTFLLIPSSQIKSAPHRQTVMHVRAYFDYDPSDDPFVPCRELGLSFQKGDILHVISQDDP
NWWQAYRDGDEENQLLAGLIPGKCFQQQRETLKRTTPDRSREQQGKRWYVKKNKQQKKKS
TSPCRNAESEDVLTYEEMSLYHQPANRKRPIALIAPTNSGHDELRRRLLVVEPNKFAVAV
PHTTRSARIHERNGREYHFVNRQSFEDDLSAGKFIESGEYGKNLYGTSTDSVRHVVNSGR
ICLLCLHTRSLKVLRSSNLKPFVIFIAPPSQERLRTLLATEGKTPKPEDLKEVIEKAREM
EQDFGHVFDATIVNAEPNEAFFELRRLIEKLDTEPQWVPTSWLC
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgacccacatgaacggttatgtgcaggaaggcaccgcccaggccgccagccac
agggagcgggcagtggactgccctggcgacgagagttgcctcgtcaagcccgtgcactgc
agtgcccagatggagagaatccaacactgccaggatgagctgaggaagaggagggaagag
gatggccgggggaagcacgacattgaccccaatgcatcactgaggctcaggaaactggca
cagaatccaaaagtgggcgttgacaatcctacctttgaggggaaggagcataccaccaaa
gatgcaattaccgacctggaggagctgctgcaagccatcaagtgggtgcagcaataccta
agtgacgctcggagccaccaggatgcggagctgctcatccagctgcttgccaatgatgac
tttaagtgcgcctacagcatctacaccgttgtgtcccaaaagatgaatcgagtcaacccc
acctcgcccctcacggcgcaagcgcaggagctatgcctagaggtccagaagatcctccag
tccagccaacagaaagagggcttggagctcagggctctgctcatcaatcctcatctccag
gcgctgatgcaagcacatgacagcttagctgtgcaggaaatggcagaggacaacgtgatc
cagtatttgggcgaaactgttaaaatggtgcggctgcataagactcgtgacactccgctg
ggcgcgaccgtgcgtaatgacatggacagtgtgatggtgagccgggtagtgaaaggcggg
actgcggagcacagcggcctgctcaatgagggggatgagatcctggagatcaacggcatt
tcccttcgtgggaagcacgtcaatgaagttcacgacttactgcaacaaatgcacggcact
ttgacattccttctcatcccgagctctcagattaaatctgccccacacagacagactgtg
atgcacgtacgagcttactttgactacgacccctcagatgacccttttgtgccatgtcgg
gagctgggcctttctttccagaaaggggacattcttcacgtcatcagccaggatgacccc
aactggtggcaggcttacagggacggagatgaagaaaatcagttactggctggactcatt
ccagggaaatgcttccagcaacagagagagaccttgaagagaacaacaccagacaggagt
cgagagcagcaagggaagcgctggtatgtgaagaaaaacaagcagcagaagaagaaaagc
acatctccatgcagaaacgctgaaagcgaagacgtcctgacgtatgaggagatgtctctc
tatcaccagcccgccaaccgcaaacgccccatagctctgatcgctcctacaaacagcggc
catgacgagctgcgccgcaggctactcgttgtcgagccaaacaagtttgccgtcgccgtc
ccacacacgaccagaagtgcgaggatccacgagcggaacgggcgcgagtaccactttgtg
aatcgacaaagcttcgaggacgacttgtcagcagggaagttcatcgagtccggggagtac
gggaagaacctgtatggaaccagcacggactctgtgcgacacgtggtcaactctgggcgc
atctgcttgctctgcctgcacaccaggtcgttgaaggtcctgaggtcctccaacctcaaa
ccgtttgtaatcttcattgcacctccttctcaagaacgactgcgcaccctgctggctact
gagggaaaaacacccaagccagaagatcttaaggaggttatcgagaaggctcgcgagatg
gagcaggacttcggccacgtttttgacgccaccattgtgaacgcggagccaaacgaggct
ttctttgaactgcgcaggctcatcgagaagctggacaccgaaccgcagtgggtgcccacc
tcttggctctgctga
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