Syngnathus scovelli (Gulf pipefish): 125990239
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Entry
125990239 CDS
T08785
Symbol
hlx1
Name
(RefSeq) H2.0-like homeobox protein
KO
K09339
homeobox protein HLX1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125990239 (hlx1)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
125990239 (hlx1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
125990239
NCBI-ProteinID:
XP_049613101
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Position
20:complement(3755902..3760090)
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AA seq
379 aa
AA seq
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MYTAGLNPFYASNFSLWSAYCAGGFAVDTSKKPSFCIAELLQAGDAENIPGSSALMVHVG
QHRASSGGSPLRPSTIGPGEARASVYGARASPASPYHRQGLQLTSVPRGALNSSQAPPPS
SKDLKFGIDRILSTDFDAKGKDKLRDLTSIVSSNRQSGVHIPLQPAAGQYFSSIEPGMSE
ASAMMSSLGSGGRQSGQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLE
KRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQSQKDKDKEQPDGDR
TPESGRDPKETAESECESDVERSECECESDDAPEGDKTDVTHNVDLCERNKTSVIINAGV
EAAHSDSGSSSSASPQLLI
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgccggtctcaatccgttttacgcctcaaatttcagcctttggtctgcgtac
tgcgcaggaggcttcgcggtggacaccagcaagaaaccgtcgttttgcatcgcggagctc
ctccaagccggtgatgcagagaacatcccgggctcctcggccctcatggtgcacgtgggc
cagcaccgcgcgtcctccggcggctccccgctgcgtccctctacaattggaccgggggag
gctcgcgcgtctgtgtacggggcaagggcaagccccgcgtctccgtaccacaggcaagga
ctacaacttacctcggtgccgagaggagctctcaacagctcgcaggcccctccgccttca
agcaaagacctcaaatttggaattgatcggatattgtccacggattttgacgcaaagggg
aaggacaagttgagagatctcacgtccatcgttagctccaaccgtcagtcaggcgtccac
atccctcttcagcctgctgctggccagtacttctcctccatagaacctgggatgagcgag
gcttccgccatgatgagttcactgggcagcggcggcagacaatcaggccaacatcagttt
caagacaccttcccaggcccgtatgccgtcctcaccaaagacacaatgccgcagacatac
aagaggaaacgctcctggtccagggcggtcttctccaacctgcaaagaaaaggcctggag
aagcggtttgagatccagaaatacgtcaccaagcctgacagaaaacaactggctgccatg
ctcggattgacagatgcgcaggtgaaagtgtggttccagaatcgacgcatgaagtggcga
cactccaaagaggcccagtcccaaaaagacaaagacaaagagcagccggacggggaccgg
acgcccgagtccggaagggaccccaaagagacagccgagtccgagtgcgagagcgacgtt
gagcgtagcgaatgcgaatgcgagtccgacgacgctccggagggagacaagaccgacgtg
acgcacaatgtggacctttgtgagcgcaacaaaaccagcgtaatcatcaatgccggcgtg
gaggcggctcactcggactcgggttcttcttcgtcggcgtccccccagcttctaatatga
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