Syngnathus scovelli (Gulf pipefish): 125990246
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Entry
125990246 CDS
T08785
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1 isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040
Spliceosome
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125990246 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125990246 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125990246 (snw1)
Spliceosome [BR:
sscv03041
]
Complex B
Other components
Prp19-related factors
125990246 (snw1)
Complex C
125990246 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
125990246
NCBI-ProteinID:
XP_049613114
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All DBs
Position
20:complement(7693972..7697780)
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AA seq
536 aa
AA seq
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MSLTSFLPVPTQLSQDQLEAEDRVRAQKSFSTALVASRREPPPYGHRGGWIPRTPEDFGD
GGAFPEIHVAQFPLEMGRQKKTNNALTMQVDAEGKVKYDAIARQGQKDKVIFSRYTDLLP
KEVMNEDTPELQKPDEEAVEELTEKTRAALSKQVSQKIAAAMPVRAADKQAPAQYIRYTP
SQQGVAFNSGAKQRVIRMVEMQRDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKE
QQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKAREA
VEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKSHGDKGGEDGEARERDEIRHDR
RKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGVPNPRTSSSEAQYDQRLFNQSKGM
DSGFAGGEDETYNVYDKPFRGGRDMASNIYRPSKAIDKDAYADDFDTLMQNNRFVPDKEF
SGADHGQRREGPVQFEEDPFGLDKFLEEAKQHGGSKRASTSSRSKDDYHDKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacgagctttttaccggtgccgacccagctgtcacaagatcagctggaagca
gaggacagagttcgcgcccagaagtcgttctctactgccttggtcgcttcccgaagggaa
ccgccaccttatggacacagaggtggatggatacctcgcactcccgaggactttggagat
gggggagcttttccagagatccatgtggcacagtttcctctggagatgggtcggcaaaag
aaaaccaacaatgctctgaccatgcaggtggatgcagagggaaaagttaaatatgatgct
attgcgagacaaggacaaaaagacaaggtgatcttcagtaggtacacagatctacttcca
aaagaagttatgaatgaagacaccccagaattgcagaagcctgatgaggaagctgttgaa
gagctgactgagaagactcgtgctgccctcagcaagcaggtatctcaaaagattgctgct
gccatgcctgtgcgagcagcagacaagcaggccccagcacagtacatcaggtacacccca
tcccagcagggagtggctttcaactctggagccaaacaaagagtcatccgcatggtggaa
atgcagagagaccccatggaaccaccacgttttaagatcaataagaagatccctcgtgga
ccaccgtcaccaccagctccagtcatgcattctccgagtagaaagatgacggtgaaagaa
cagcaggagtggaagattcctccatgcatctccaactggaagaacgctaagggttacacc
atccctctagacaagcgtctggcagcggatggcagggggctgcaaacagttcacatcaat
gaaaactttgccaagctggctgaggccctctacatcgctgatagaaaggccagagaggcg
gtggagatgagagcccaggtggaaaagaagatggcccagaaggagaaagaaaagaaagaa
gagaaactcagggagttagcccaaatggcccgagatcgcagggcgggaattaaaagtcat
ggggacaaaggcggcgaggacggagaggcaagggagcgtgacgagatccgccatgacaga
aggaaagagagacagcacgacagaaacatttccagggcagctcctgacaagagatccaaa
ctgcagagggaccaagacagagacattagtgagctcatcgctctgggtgtgcccaaccct
cgcaccagcagcagcgaggcccagtatgaccagcgacttttcaaccagagtaaaggaatg
gatagcggctttgccggcggcgaggacgagacgtacaacgtgtacgacaagcctttccgc
ggcggcagagacatggcctccaacatctaccgacccagcaaagccatcgacaaggacgcc
tacgctgatgactttgacacactcatgcaaaacaacaggttcgtgcccgacaaggagttc
tcgggtgccgatcacgggcagaggcgcgagggtcctgtccagtttgaagaagaccctttc
ggtctggacaaattcttggaagaagccaagcagcacggcggctccaagagagcgtccacc
agcagccgctccaaggacgattaccacgacaagaagcgcagaaaggagtga
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