Syngnathus scovelli (Gulf pipefish): 125990250
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Entry
125990250 CDS
T08785
Symbol
lft1
Name
(RefSeq) lefty1
KO
K04668
left-right determination factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125990250 (lft1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sscv04052
]
125990250 (lft1)
Cytokines and neuropeptides [BR:
sscv04052
]
Cytokines
Transforming growth factors (RSTK binding)
125990250 (lft1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
125990250
NCBI-ProteinID:
XP_049613120
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All DBs
Position
20:complement(7608431..7610854)
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AA seq
359 aa
AA seq
DB search
MDFLRAWVLCTVFLGLTKAFTHEDMKETLLRKLGLDEVPKIHKRDLENLVVPAHVRNKYL
SMMKMHHSRRRRSLPSLVGILRGIPGNADIPGEYVYSDTTRHRMVFDMESIIPENSEVTM
AELKLYQRVSHNKRLAVERKNHRPVSNARVSIYWVEELPNGSNRTSLVDSRLIPIHETGW
KSFDVTQAVHYWSKTQQQRTPMHLEVWIEGERPGSYAAEVAKSVRFTTQEQTDNTLGKPE
LVLYTLNLEEYGSRGDCDVNQSKGTCCREEYFVDFRALTWTQYWIIEPAGYQAFRCTGSC
RQPKHNYGYGERRCTVSESAPLPIMYLVKKGDYTEIEVAEFPNMIVERCACTMDNVSVV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctccgcgcttgggttttgtgcaccgtcttcctcgggttgactaaggctttt
acgcatgaggatatgaaggagacgctcctgcgcaaactgggcttggatgaggttccaaag
atccataagagggatttggagaatttggttgtcccggctcatgtcagaaacaaatacttg
tcaatgatgaagatgcaccacagcaggagacggcgatctttgccaagcttggtcggcatt
ttgagaggaattcctggcaatgctgacattcccggcgaatatgtatattcggacacgact
cggcatcgaatggtgttcgacatggagtcaataatcccagaaaacagcgaggtgaccatg
gccgagctcaaactgtaccaaagagtgtcgcacaacaagcgcctcgcggtagagaggaag
aaccacagacccgtcagcaacgcccgagtcagcatctactgggtcgaggagttgccaaac
ggatccaaccgcacctcactcgtggactcacggttgattcccattcacgaaactggctgg
aagagctttgatgtgacccaggccgtgcattattggtccaagactcagcagcagaggacg
ccaatgcacctggaggtgtggatcgagggcgagagacctggcagctacgcggcggaggtg
gcgaagagtgtgcgctttaccacccaggagcagacggacaacaccttgggcaaacccgag
ctcgtcctctacacactcaacctcgaagaatacggctctcgtggtgattgtgacgtgaac
cagagcaagggcacctgttgcagggaggagtactttgtcgacttccgtgccctcacgtgg
acccagtactggatcatcgaaccggccgggtatcaggccttcaggtgcaccggaagttgc
aggcagcccaagcataactatggctacggggagaggaggtgcacggtgtcggagagcgcc
cccttgcccattatgtacctggtgaagaagggcgactacacggagatcgaagtggcagag
tttcccaatatgatcgtggagaggtgcgcgtgcaccatggacaatgtctccgtagtgtga
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