Syngnathus scovelli (Gulf pipefish): 125990268
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Entry
125990268 CDS
T08785
Symbol
rngtt
Name
(RefSeq) mRNA-capping enzyme
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125990268 (rngtt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125990268 (rngtt)
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
125990268 (rngtt)
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
125990268 (rngtt)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
125990268 (rngtt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
DNA_ligase_A_M
Y_phosphatase
PTP-NADK
Y_phosphatase2
Y_phosphatase3
PTP-SAK
Motif
Other DBs
NCBI-GeneID:
125990268
NCBI-ProteinID:
XP_049613174
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All DBs
Position
20:complement(9324511..9362257)
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AA seq
599 aa
AA seq
DB search
MSQLGPPPRWRNCPRRGQPVAGKFLPMKTMLGPRYDDQVAEENRFYPSMLSNYLKSLNVK
MGLLVDLTNTTRFYDRNDIEKEGVKYFKLQCKGHGECPSTETTATFVRLCEHFIEKNSTD
LIGVHCTHGFNRTGFLICAYLVEKMDWSVEAAVAAFAQARAPGIYKGDYLKELYRRYGEE
EDAPAPPTMPEWCFEDDAGESDDDAPKQESGPSSSGSPLGKRKKEKLKLGAVFLEGVTVK
GVTQVTTQPKLGEIQRMCQEMAEWNKSGFPGAQPVSMNRENLSFLEQRLYKVSWKADGTR
YMMVINGRNEVFMIDRDNTVFHIANLEFPFRKDLRAHLANTLLDGEMVIDKVNGQPVPRY
LIYDIIKFNGQNVGQWDFNIRLLCIEKEIISPRMEKMKTGQIDKTKEPFSVRNKPFFDLQ
ASRKLLEGSFTSQVSHEVDGLIFQPCGRYKPGRCDDILKWKPPNLNSVDFRLKITKVGGE
GLLPQTVGLLYVGNYDRPFAKMKATKELKLYDNKIIECNFANNSWVFMRQRIDKSFPNSY
DTAMAVCKSIQEPVTKKILLEYVDRCPQAVQAQTRKHQTDPDSELMPPPPPKRPNRSIQ
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaattgggacccccaccccgatggcggaattgtcccagaagaggacaaccagtg
gcaggtaaattcttgcccatgaaaactatgttgggtccccgatatgatgaccaagttgca
gaggagaaccgattttacccgagcatgctgtctaactacttgaagagtctaaatgtaaaa
atgggtttgctcgtggatttgacgaacacgacccgcttttacgaccgcaacgacattgaa
aaggaaggagtcaaatactttaagctacagtgtaaaggtcatggagaatgtccttctaca
gagacgactgctacgttcgtccgactctgtgaacatttcatagagaagaactctacagac
ctaataggtgtccactgcactcacgggttcaatcggactggctttttgatatgtgcttat
ctggtggagaagatggattggagcgtggaagcagccgtcgcagctttcgcccaggcccgg
gcccccgggatctacaagggcgactacctcaaagagctttaccgtcgctacggcgaggag
gaggacgcgcccgcccccccaacgatgcccgagtggtgcttcgaggacgacgccggggaa
tcggacgacgacgcgccgaagcaggagtccgggcccagctcgtccgggtcgccgctcggg
aagagaaagaaggagaagctcaaactgggcgctgtattcctcgaaggggtcacggtcaaa
ggtgtcacacaggtcaccacgcaacccaaactaggcgagatccaaagaatgtgtcaagag
atggccgagtggaacaagtctggttttcccggtgctcagcctgtgtcaatgaatcgggaa
aacctcagtttcctcgagcagcgtctctacaaagtcagctggaaagctgacggaacccgg
tacatgatggtgatcaacgggcgaaatgaagttttcatgattgacagagacaatacggtc
ttccacatagccaatttagagtttcctttccggaaagatctacgtgcccatcttgcaaac
actcttttggatggggagatggtcattgacaaggtgaacggtcagcccgtccctcgctat
ctgatatatgacatcatcaaattcaacggacaaaacgtgggtcagtgggatttcaatatc
cggttgctatgcatcgaaaaagagatcatttctccacggatggaaaagatgaagaccgga
cagattgacaaaacgaaggagcccttcagcgttcgaaataagccgttcttcgaccttcag
gcgtcacgcaagctcttggaaggcagttttacatcgcaggttagccatgaagttgatggc
ctcatcttccagccatgcgggaggtacaagcccggcaggtgtgatgacatcttgaaatgg
aagcccccgaacctcaactcggtggactttcgcctcaagatcacaaaagtcggaggagaa
gggctgctgcctcagactgtcggcttgctttacgtcgggaactacgatcggccctttgca
aagatgaaggccacgaaagagctcaaactgtacgacaacaagatcatcgagtgcaacttt
gccaacaacagctgggtgttcatgaggcagaggatagacaagagcttccccaactcctac
gacacagccatggcggtatgcaaaagcatccaggaacccgtcaccaagaaaatcttgttg
gaatacgtggaccgttgccctcaagcagtccaagcccaaacccgtaaacaccaaacagac
ccggattctgagctaatgccccctccccctccgaagagacccaaccggtccatccaatag
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