Syngnathus scovelli (Gulf pipefish): 125990278
Help
Entry
125990278 CDS
T08785
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040
Spliceosome
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125990278 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125990278 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125990278 (srsf5b)
Spliceosome [BR:
sscv03041
]
Common components
Common spliceosomal components
SR proteins
125990278 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
125990278
NCBI-ProteinID:
XP_049613200
LinkDB
All DBs
Position
20:9014615..9018318
Genome browser
AA seq
355 aa
AA seq
DB search
MSGSRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDAEDAVYDLDGK
ELCNERVTIEIARGRQHPGRGGRGGGGGGGGGGRFPDRYDRGEQNNRSRNPPPMRTENRL
IVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGKEFN
GRKIKLIEAAQKRSKSRSRSRSSSRSHSRSRSRGRSSSGSPRRSGSPRRSGSPRRSGSPR
RSGSPRRSGSPRRSGSPRRSGSPGRSGSPRRSGSPGRSGSPRRSGSPRRSGSPAKRSSRS
RSGSPTSNASPTNSKSIDPNKHSLSANPLPPSSPPHDKGHGSRSHSLSPSTESQP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatctcgcatattcatcggccgactaaacccctcagcgagggagaaagatgtg
gagagattcttcaaagggtacggacgcattcgagacatcgatctcaaaagaggttttggc
tttgtggaatttgaggatcccagagatgctgaagatgccgtgtatgatcttgatggcaaa
gaactgtgtaatgaaagagtgaccatcgagattgctcgtggacgtcaacaccccggcaga
ggaggtagaggaggcggcggcggtggcggtggaggaggccgcttccccgatcgttatgat
cgaggcgaacagaacaatcggagtcgcaacccgcctccgatgcgtactgagaatcgtctg
attgtggagaacttgtcctcccgtgtcagctggcaggacctgaaagatttcatgaggcaa
gcaggagaggtcacatttgcagacgcacatcgaccaaaactcaacgaaggggtggttgag
tttgcctcttacagcgacctgaaaaatgctcttgagaagctgtctggaaaggagttcaat
gggagaaaaataaagctcattgaggcagcccagaagaggtccaaaagccgttcccgctcc
aggagttcatctcgctcccactcacgatcccggtcccgtggtcgctcttcatcaggcagt
cccaggcggtctggcagtcccaggcgctccggtagtcccaggcgctccggtagtcccagg
cggtctggcagtcccaggcggtctggcagtcccaggcgctccggtagtcccaggcgctcc
ggcagtcccgggcgctctggcagtcccaggcgctccggcagtcccgggcgctccggcagt
cccaggcgctccggcagtcccaggcgctccggcagcccggccaaacgcagcagtcgctcc
cgtagcggctccccaaccagcaatgcatcccccactaactccaagtcaattgatccaaac
aaacattccctctctgctaaccctcttcctccttcttctcctcctcatgataaaggccat
ggctctcgttcacactctctttccccttccaccgaaagccagccttaa
DBGET
integrated database retrieval system
