Syngnathus scovelli (Gulf pipefish): 125990345
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Entry
125990345 CDS
T08785
Symbol
ino80
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125990345 (ino80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125990345 (ino80)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
125990345 (ino80)
INO80 complex (yeast)
125990345 (ino80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
125990345
NCBI-ProteinID:
XP_049613388
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All DBs
Position
20:complement(10092852..10109202)
Genome browser
AA seq
1558 aa
AA seq
DB search
MASGQGGRPEPAGTAAAACSSALAKPLYLQRLERSLRLESFLHQTAAIFNRDVTSDDSDD
SDGALGSGLSIEPLTVKREPCDQEDAFVEGKPLNGVLLQDQKTDQANLYNFSKMKKNRKW
LKSLLLSDNTTDSDTDSDDSDFSMSRDELHDMLRLHRYTRQHQNKFHTDRELQHYQYYST
GLLSSQDLFYEQQRHLVGPKKKKIKEEKKFKAKLKKVKKKKKRGEGDFSDESVHYGPPKT
FAKFSQDAPAPILKKKHLSLEQLNARRRKVWLTIAKKEIPKSFKQKTSAKNLVLTNAKKL
AHQCMREVRRGAIQAQKNCKETLPRARRLTKEMMLYWKKYDKVEKEHRKRAEKEALEQRK
LDEEMKEAKRQQRKLNFLITQTELYAHFMSGKASADSPSGDDAQEEILKKLDDTSARRQI
DIGGGVMVNVGPEDYDSEYYKSQALRNAQEAYHIHQQRTRMFDEDSHDSRCASSSTAASG
FGESYSLSNPSIQAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKT
VQSIALLAHLAERDNIWGPFLIISPASTLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRK
FWSQKTLYTQNAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQ
FQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHDEFNEWFSKDIESHAENKSAIDEN
QLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQALRNKISIEDLLQS
SMGTSQQSHSTTSSLMNLVMQFRKVCNHPDLFERQETRSPFHMSLPPYVLSKFLYRHGLL
HVHRQATDKSLRVLLSPFSPNHIQQSLFHRKGDDEGNCFSFLRFIDVSPAEMSNLMLQGT
LVRWLALFLSLKAAYRLYCQQLFILQEEGAGGTPRSRTLSHKDLLLWIHRPSSFPNTQNS
PVLRNLVFTALRPGMVGHADVTIHCRRSATSRVWPCQPALPPKFLLAATPRVTAVPMERY
CADRSAEHEWRVTRVGGGAVFKECFLYGTPDLASDWRRRAGSFFPQQPGGVMSVFPQHGW
SYIRIPDKESLITESGKLHTLDILLSRLKAQGHRVLIYSQMTRMIDLLEEYMVYRKHTYM
RLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQ
AMDRAHRLGQTKQVTVYRLICQGSIEERILQRAKEKSEIQRVVISGGNFKPDTLKPKEVV
SLLLDDDELEKKLRQRQEEKRQQEESSKVKERKRKREKYAEKKKTEECEIKKRKEANLVI
VHAPSADNSNLSADGDDSFISVEMDSAMPSPFSEPACVSLCAPLGQQISLSSELQPGSLP
PEAEGDESSNDMLVIVDEPLSSAPQSRATNSPVSLSGSVSDNMNGISTSDNFSPGRGRSG
RSRGRPKGSGGGPKSGGKGRARKSTAGSAAAMAGAMAGAAAASAAAYAAYGYSVSKAGQA
VSNPLQPSVARSGPGPAFNSARGSSPQAKAAGAAAVLGPGKQLLHGHHQLVRKSKGPQ
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggcagggcgggcggcccgagccggctggcacggcggcggcggcgtgttct
tcggctctggcgaaaccgctctacctgcaacgcttggagcgctccctcaggctagaaagc
tttctgcatcaaacggccgccatctttaacagagatgtcaccagcgatgacagcgacgac
agcgacggcgctctgggctccggcctctccatcgaacccttgacggtgaagagggagccc
tgtgaccaagaggacgcctttgtggaaggcaagcccctcaacggcgttcttctgcaagac
caaaagaccgaccaagcaaacctgtacaatttctcaaaaatgaagaagaatcggaaatgg
ttaaagagcctgttgctgagcgacaacaccaccgactcggacacggactcggacgactcg
gacttcagtatgtcgcgtgacgagttgcacgatatgctgaggttgcaccgctacaccagg
cagcaccagaacaagttccacacggaccgtgagcttcaacactatcagtactacagcaca
gggctcctttccagtcaagacctcttctatgagcaacagcgccatcttgtgggtccaaag
aagaagaaaatcaaagaggagaaaaaattcaaggccaagctgaagaaagtgaagaagaag
aagaagcgcggcgagggcgatttttcagacgagagcgtccattatgggcctcccaagacc
ttcgctaagttctcgcaggacgcaccagcgccaatattgaagaagaagcacctgagcttg
gaacagctgaacgcacgccgacgtaaggtgtggctcaccattgccaagaaggagatcccc
aagtctttcaagcagaagacctccgccaagaacctggtcttgaccaatgctaaaaagttg
gcccaccagtgcatgcgagaggtgcgacgaggcgccatccaggcacagaagaactgcaag
gagacgctacctcgcgcccgccgcctcaccaaggagatgatgctctactggaaaaagtac
gacaaggtggagaaggagcaccggaagcgggcggagaaggaggcgctggagcagcggaaa
ctggacgaggagatgaaggaggccaagcgtcagcagcgcaagctcaacttcctcatcacg
caaacggagctctacgcccacttcatgagcggcaaagcctcggccgactcgccgagcggc
gacgacgcccaggaggagattctgaagaagctggacgacaccagcgcgcggcggcagatt
gacatcggcggaggcgtcatggtcaacgtggggccggaggactacgacagtgaatactac
aagtctcaagctctgaggaacgcgcaggaggcctaccacatccatcaacagagaacgcgg
atgttcgacgaggactcccacgacagccgctgcgcgtcgtcctcgacggccgcctccggc
ttcggcgagagctacagcctgtccaacccgtccatccaggccggtgaagacatcccacag
cccaccatcttcaacggaaagctgaagggctaccagctcaaaggcatgaactggctcgcc
aacctctacgagcaaggtattaacgggatcctcgccgatgagatgggtctcggcaagacc
gttcagagcatcgccctgttggctcatctcgcagagagggacaacatctggggcccgttc
ctcatcatctccccggcgtccacgcttaacaactggcatcaggagttctcacgctttgtg
cccaagttcaaggtgttgccatactggggaaaccctcacgatcgcaaagtcatccggaaa
ttctggagccagaaaaccctgtacacgcagaacgcaccgttccacgttgtgatcaccagc
taccagctagtggtccaggacgtcaagtacttccagagagtcaagtggcagtacatggtt
ctggatgaggcccaggcactgaaaagcagcacgagcgtgcggtggaagatcctcctgcag
ttccagtgtcgaaacaggctgctcctcacggggacgcccatccagaacacaatggccgag
ctgtgggccctcctgcatttcatcatgcccaccttattcgattcccacgatgaattcaac
gagtggttctccaaggacatcgagagccacgccgagaacaagtcggccatcgatgagaac
caactttctcgcctgcacatgatcctcaagcctttcatgctgcgaaggatcaagaaggat
gtggaaaacgagctctcagacaagattgagatcctgacctactgccagctcacgtcgagg
cagaggttgctctaccaggccctgaggaacaagatctccatcgaggacctactccagtcc
tccatgggcacgtcccagcagtcccacagcaccacgtcgtccctcatgaatctggtcatg
cagttcaggaaggtgtgcaatcatcctgacttgtttgaacgccaggagacacgctctcct
ttccacatgtccctcccgccctacgttctgtccaagttcctctaccgtcacggcctcctc
cacgttcaccgccaggccaccgacaagtcactgcgagtgctgctgtctcccttttcccca
aatcatatccagcagtcgctctttcacaggaaaggtgatgacgaaggaaactgtttttcc
ttcctgcgcttcatcgacgtgtcgccggccgaaatgtccaacctcatgctgcaaggcacc
ttggtcaggtggttagccctttttctgtccctgaaggcagcgtaccgactctattgtcag
cagctgttcatcctccaggaagaaggcgcaggggggacgccacggtccaggactctgtct
cacaaagacctcctcttgtggatacacagaccctcatccttccccaacacgcaaaatagc
cctgtgctaaggaacctggtcttcacggccctcaggccaggtatggtaggacacgccgac
gtgaccatccactgtcgacgttctgccacctcccgagtgtggccatgccagccagcgctt
ccgcccaagttcctcctggcagccacacctagggtcacggcggttccaatggagcgctac
tgcgccgatcgaagcgccgagcacgagtggcgggtgacgcgcgtcggcggcggcgctgtc
ttcaaagaatgcttcctctacggcacgcccgacctcgcctccgattggcggcggagggcg
ggctccttcttcccgcaacaacccggcggcgtgatgtccgtcttccctcagcacggctgg
tcctacattcggataccggataaggaaagtctaatcacggaaagtggcaagcttcacacc
ctggacatcctgctgagtcgactaaaggcccagggacaccgagtcctcatctattcccag
atgacccgcatgatcgacctgctcgaggagtacatggtttaccgcaagcacacctacatg
cgcctggatggctcctcgaagatctccgagcgtagagatatggtggcggacttccagagt
cggacggacatctttgtgttcctactcagcaccagagcgggcgggctcggcatcaacttg
acggctgccgacactgtcatcttctacgacagtgactggaaccccaccgtggaccagcag
gccatggaccgggcccaccgactgggtcagaccaagcaggtgacagtctatcgactcatc
tgccaggggagcatcgaggaacgcatcctgcagcgagctaaagagaagagcgagattcaa
agggtggtgatatccggcggtaacttcaaacccgacacgctcaaacccaaggaggtggtc
agccttcttctggatgatgacgagctagagaagaaattacgtcagagacaagaggagaag
cgacagcaagaggagagcagcaaagtgaaggagcgcaagaggaagagggagaagtatgct
gagaagaagaagacggaggagtgtgaaatcaagaagaggaaagaggccaacctggtcatc
gtgcacgcgccctcggccgacaactccaacttgtcggcggacggcgacgactccttcatc
agcgtggaaatggactcggccatgcccagcccctttagcgagcctgcgtgcgtgtctctg
tgtgcacctttgggccagcagatctcacttagcagcgaactccagcccggctcgctgccg
ccggaggccgagggggacgagagcagcaacgacatgctggtcatcgtggacgagccgctg
tcttcggcgccgcagtcgcgggccaccaactcccccgtctccctgtccggttccgtctcg
gacaacatgaacggtatttcgacctcagacaacttcagtcccggcagagggaggtcgggc
cggagtcgaggacgcccgaaaggatccgggggcgggcccaagtctgggggcaaagggcgc
gcgcgcaagtcgacggcgggcagcgcggcggcgatggcgggagcgatggctggagcggcg
gctgcgtctgcggcagcgtacgccgcgtacggctacagcgtttccaaagcgggccaagcc
gtgtccaaccccctgcaaccttccgtggctcgttctggacccggccccgccttcaactcg
gccagaggctcgtctccgcaagccaaggccgcaggcgcagcggctgttttgggaccgggc
aagcagctgcttcacggccaccatcaacttgttaggaaaagcaaaggaccccaatga
DBGET
integrated database retrieval system
