Syngnathus scovelli (Gulf pipefish): 125990404
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Entry
125990404 CDS
T08785
Symbol
tbc1d32
Name
(RefSeq) protein broad-minded
KO
K28444
TBC1 domain family member 32
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125990404 (tbc1d32)
Cilium and associated proteins [BR:
sscv03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125990404 (tbc1d32)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BROMI
BROMI_C
BROMI_N
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
125990404
NCBI-ProteinID:
XP_049613503
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All DBs
Position
20:10286652..10321356
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AA seq
1296 aa
AA seq
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MSCDDEEQLSALLKQFLRSIDEQLSNAPSPQSAEDILLHLEETDKNFHNYDFVKTLRQRL
ETSLGCVVDEEIRKLPRDDEQHAVGSGHDVLIHAAAGRSRASLQYQNLTQSLRATMTAAV
DGLVRRFDEDQLRKEEEMQHGRYSDECSDSGDSFNQCYTFIQQEQLQALAEKLESGQPKE
VRREALQVLRCAPPSDVLSCDGWARLRQNLCAALSEPDAELSDHILQFFAKSFSSSPLNV
TREIYTSLAKSTEYTFSSLKLSFPSGAAGLDISRPQIGTLLKQMRLMNDFQKEVTSFWIR
HPEKYMEEIIESTFSLLSLSGDSTEKVLEPSHLLALLDVRATWFTKWMHGSYSRTVVLRL
LQSKHKCLMEAAVQQCVLYQECCQRSPHLHPEERQSSGSDVSGVYSGKELQYAVVVHSLC
VLGKILLHANGRKLFPIKVAAREDPLSVTDLVVVLINIMLQHPQPFCNDSQHADALCPSG
LVMATLTAMCERTECADQCLHQTPVIQTLMAPVIQALNGGQSKLKCPAATLPQVADVLAR
MVNTDRGLALFLYDKNLLVGHSERSTTAHALLRFTLTLLERELSASGLDEAHSLRALCGA
FVFLCGRMCNSCEGLQVLRAYGLHKAAAAAWRKSSSLSERIPTPVPGKNPATSTQELQHM
LMWEETLLDSLLNFAATPKGVLLLQQSGAMRECVSYMFSRFSKKLQVSRCEKFGYGVIVT
QLAATAAGAMALQHSGFVRALVLDLWSALECGSEDARAVRPKPTPMEPIDRSCLKSFLSL
VNLLSSSQSVWQLLSGQPLADKKEYTLREVPSSVPDLIDRLIAVNSATKIRSLFHYEHSH
TFGLRLLSVLCSSLDSFLLLESQYNICNVLLQGQRDNVIDRDGGNESFILDNISVERNHV
LVRVALVGGPSERRLPPRALRQVSLTSPKGKSPRLCRGDAPYPWPMFSSFPPPTCYTLDP
PRSQQNPLEPEMIDFLTSTQDGWMETCRRLYRKIVTAGHLSATVLADLLEKVVFHLSKCS
TERFFSPPEYNKELEMSADAVALSPVELLGMDVCLRYGLALKLLSQEEAAGHLTLLMKHI
KNFLSRRRVPMSSPRLTDQKEYPGHDWLTSTVFLMLSGDWRRSLRVLRNLSSLLTSALIW
PASVHASVDLPSRVAESGMPPLYWCSAHYVEMLLKEQLPLVHAAFRMSAFTPSQICIHWL
TQCFWNFLDWPEICHYVCICVLMGADYQVYACLAVLKHLQPLLLQQTQARNMQVFLKEEP
IQGFRFCDYLDFMQLLERRYRNVVLSDMKSIRNPDL
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcgatgatgaggagcagctgtccgctctactcaagcagtttctgagaagcatc
gacgagcaactcagtaacgctccttcgcctcaaagcgccgaggacattcttcttcacctg
gaggagacagacaagaacttccacaactatgattttgtcaaaacactacgtcagcgcctg
gagacctccctggggtgcgtggtggacgaagagatcagaaagctgccccgggacgacgaa
caacacgctgtgggctcaggtcacgacgtcctcatccacgcggctgccggccgaagccga
gcgtcgctgcagtaccaaaacttgacgcagagcttgagagccaccatgactgcggccgtg
gacggcttagtcagaagatttgacgaggaccagctaaggaaggaagaggagatgcaacac
ggtcgctactctgacgaatgctctgacagcggcgactccttcaatcagtgttacaccttc
attcagcaggagcagctgcaggctttggctgagaaattggagtcaggtcaacccaaagag
gtccgcagggaggccctgcaggtgctccgttgcgcgccgccatccgatgtgctgagctgc
gacggctgggcccgcctacgccagaacctgtgtgccgcgctgagcgagcccgacgctgag
ctcagtgaccacattcttcagttcttcgctaagagcttctcctcgtcgcccctgaacgtc
acccgggagatctacaccagcctcgccaaaagcacggagtacactttttcgtctctcaag
ttgagctttccgagcggtgcggccggcttggacatcagcagaccccaaatcggcactctc
ctcaagcagatgcgtctgatgaacgactttcaaaaggaggtgacctctttctggatccgc
cacccggaaaagtacatggaagaaatcatcgagagcaccttctccctgctgtccctcagt
ggcgactcgacggagaaagtcttggagccttctcacctgctggcactgctggacgtccga
gccacttggttcacaaaatggatgcacggctcctacagccgaacggtggttctccgtctc
ctacagagcaaacacaagtgtctgatggaagccgctgtgcagcagtgcgtcctttaccag
gaatgctgccagcgttctccacatctccaccctgaggagcggcagagctcaggttcagac
gtgagcggcgtctatagcggcaaggagctgcagtacgccgtggtcgttcattcgctgtgc
gtcttgggcaaaatcctcctccacgccaacgggaggaagctctttcctatcaaagtggct
gcacgcgaagatccactcagtgtgacggacttggtggtggttctcataaacatcatgctc
caacatccgcagccattttgcaacgacagccaacacgcagatgcgctgtgcccgagcggc
ctggtgatggcgacgctgaccgctatgtgtgagaggaccgagtgcgctgaccagtgtctc
caccagacgccggtcattcagactctcatggcacccgtcatccaggcgctcaatggaggc
caaagtaaattaaagtgtcccgcagccaccctgcctcaggtggcggacgtcctggcacgg
atggtcaacacagaccgagggttagctcttttcttgtatgacaagaatctgcttgtgggc
cacagtgagagaagcacgaccgctcacgcgctgcttcgcttcaccctgacgctgctggaa
cgggagctctcggcgtcgggcctggacgaagcccactcgcttcgtgctctgtgcggggcc
ttcgtcttcctgtgcgggaggatgtgcaactcttgcgagggcctgcaggtcctgcgagcg
tacggcctgcacaaagcagccgccgccgcctggagaaagagcagttccttgtctgaaagg
attccgaccccagtgcctggaaagaaccctgcaacatccacgcaggaattgcagcacatg
ctgatgtgggaggagacattgctggacagcctgctcaactttgcggccacccccaagggc
gtgctgctgcttcagcagagcggcgccatgcgggagtgcgtctcctacatgttctctcgc
tttagcaaaaaattgcaggtgagccgttgtgagaagtttggttatggtgtcatagtaacg
cagttggcggccacggcggcgggcgcgatggctctgcagcactcaggctttgtgcgggcc
ctggttctggatctgtggtcggcgctggagtgcgggagcgaggatgccagggcggtccga
cccaaacccacgcccatggaacccatcgacaggagctgcctcaagtccttcctgtcgctg
gtcaacttgctgtcgtcctctcagtccgtgtggcagctgctttctggacaacctttggcc
gacaagaaagaatacacactgagggaagtgccaagctcggtgcctgacttgattgacagg
ctgattgccgtgaattccgccaccaagatccgttcccttttccactacgagcattcgcac
acgttcggcctgagattactgagtgtgctgtgctcgagtctggactcctttctgcttctc
gagagccagtacaatatctgcaacgtgttgctgcaaggccagagggacaacgtgatcgac
cgggacggcggcaacgagagcttcatcttggacaacatatcggtggagcggaaccacgtg
ctggttcgcgtcgccctcgtcggaggcccgtccgagaggagactccccccgcgggcattg
cggcaggtcagcctcaccagcccgaaaggaaaatctcctcgcttgtgtcggggagatgct
ccgtatccctggcccatgttttcatcattccctccgcccacctgctacactttagaccca
ccgagaagccaacagaacccgctggaacccgagatgatagacttcctgacgtcgactcaa
gacggctggatggagacgtgccgccggctctaccgcaaaatcgtgacagccggccatttg
agcgccacagtgctggctgaccttctggagaaggttgtgttccatctgtccaaatgttcc
acggagcgcttcttctccccgcccgagtacaacaaagagctggagatgagcgcggacgcg
gtggcgctgtctcctgtggaacttctcggcatggacgtctgccttagatacggccttgcc
ctcaaattgctcagccaagaagaggcggcgggccacctgacgctcctcatgaagcacatc
aagaatttcctctcccggcgaagggttccaatgtcctctccacggctcaccgatcagaaa
gaatatcccggccacgattggttgacgtccacggtgttcctgatgctgtctggagactgg
cggcgctctctgagggtgttgcgcaatctttcctctctgctcacttctgccctcatttgg
ccagccagcgtacacgcgtcggtggaccttccgtcgcgagtggccgagtcgggaatgccg
ccgctatattggtgctcggctcactacgtggagatgctgctgaaggagcaacttccgctg
gtgcacgccgccttcaggatgtcggctttcactccttcacagatatgcatccactggttg
actcagtgcttctggaactttctggactggcctgagatctgtcactacgtgtgtatatgc
gtcctgatgggagccgactaccaggtgtacgcctgcctggccgtcctcaagcatctccag
ccgcttctgcttcagcagacgcaagctcgcaacatgcaggtgttcctcaaggaggaaccc
atccagggcttcaggttctgtgactacctcgatttcatgcagctccttgaaagacgctac
cggaacgtcgtgcttagcgacatgaaaagcatccgcaacccagacctgtaa
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