Syngnathus scovelli (Gulf pipefish): 125990413
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Entry
125990413 CDS
T08785
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125990413
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
125990413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
125990413
NCBI-ProteinID:
XP_049613524
LinkDB
All DBs
Position
20:complement(10392697..10401732)
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AA seq
717 aa
AA seq
DB search
MSTRLCKTCGGVDIDVDQARGSAVCTGCGSVLEDNIIVSEVQFVEGSGGVSSAVGQFVST
DGPAKTPLLGSGFHTNVGKESRAQTLLSGRRQIHHLGNQLQLNQHCLDTAFNFFKMVVSR
HLTRGRKTEHIIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
IDPCLLIPRFAHMLEFGLKTHDVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMH
KFRRTVKDVIGVVKVCQATLRKRLMEFEDTPTSHLTIDEFMKVDLEQECDPPSFTAAQHK
SKMQQLERELAKKLDKVEGEISCYQDQIESELEKSRPKLRGIYAAYVHKMDPQDKEIPAD
LTPDPEDCALQSATRHLTQNFLCEVMQEEEGWSLEDRDVEEPHTAPEESEAERASRQPPS
VAMLLQSSAALDLQQSFQIFSKDHVERDMSEEDENSEGGDLDLDGIDELEIDKYILSDKE
VQVKTQLWIQQNQEYLQEQKEKEERIQKEKELGTYKEPKTSKKKKKKDNGIQAATAGEAI
QKMLVKKKISAKINYDVLKDLNGGQTASEGSGAPEKAAPEVPITPARKRRRRKKPHNDII
LDMASRSSFMGKRLGPLISGPPKKKGPSKVSSSAALDLHHVVSVTTVTTTAERQPGPEPE
SDVQSSGLSMEERENQEKVEDEEEEEEKDEEEEEDECVSALQLAKHFGCLAEEEEDI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaggctatgcaagacctgcgggggtgtggacatcgatgtggaccaggctcgg
ggcagcgccgtgtgtaccggctgcggttcggttcttgaggacaatatcatcgtttccgag
gtccagtttgtggaagggagtgggggcgtgtcttctgccgtgggacaattcgtctctact
gatggtccagcaaagactcctctgctcggttccggtttccacaccaacgtcgggaaagaa
tcccgagcgcagacgcttctaagtgggaggcgtcagatccatcaccttggcaaccagcta
cagctcaaccagcactgcttggacacggccttcaacttcttcaagatggtggtcagcaga
cacctgacgcgcggacgcaaaaccgaacacatcatcgcggcttgcctctacctggtgtgt
cgcaccgaggggacgccacatatgttgctggatctgagcgacctgctgcaggtgaatgtt
tacatcctggggaaaacgttcttgttgttggctcgggaactctgcatcaacgctccagcc
attgatccatgtctgctgatccctcgcttcgctcacatgttggagttcgggttgaagact
cacgacgtctccatgacggctcttcggctagttcagaggatgaagcgggactggatgcac
acgggccgccgaccctctggactgtgtggcgccgccctgctggtggcggcccgcatgcac
aagttccggcgtacggtgaaggacgtcatcggggtggtcaaagtgtgtcaggccaccctg
aggaagaggctgatggagtttgaggacacgcccaccagtcacctgaccatcgacgagttc
atgaaggtggatctggagcaggaatgcgatccgccgtcttttaccgccgctcagcacaag
agcaagatgcagcagctggagcgagagctggccaagaagttggacaaggttgaaggagag
atcagctgctaccaagaccagattgagagcgagctggagaagagccgacccaaactccga
ggaatctacgccgcctacgtacacaaaatggacccacaggacaaggaaatcccggcagac
ttgacgcccgaccctgaagattgtgccctccaaagcgccacccgtcacctcacgcagaac
ttcctgtgcgaagtgatgcaagaggaggaagggtggagcctggaggaccgtgacgtcgaa
gagccgcacacggcgccggaggagtccgaggcggagcgagcttcacgccagccgccctct
gtcgccatgcttctacaaagttctgccgctttggacctccagcaaagcttccagatcttc
agcaaggaccacgtggagcgcgacatgtctgaggaggatgagaattcggagggtggcgac
ctggatctggacggtatcgatgagctggagatcgataagtacatcctgagtgacaaagag
gtccaagtgaagacgcagctgtggatccagcagaaccaagaatacctgcaagagcagaaa
gagaaagaagaacgaattcaaaaagagaaggaactgggaacgtacaaggagcccaagacc
tccaagaagaagaagaagaaggacaacggcatccaggcggccacggcgggcgaagccatc
cagaagatgttggtgaagaagaagatctccgccaagatcaactacgacgtcctcaaagac
ctcaacggtggccagacggccagcgaaggcagcggcgctcctgaaaaggccgcccccgaa
gtccccatcacacctgcgagaaaaagacgccgtcgaaagaagccgcacaatgacatcatc
ttggacatggcaagccgctccagcttcatgggcaagaggctgggcccgctcatctcagga
ccaccaaaaaagaaaggcccgtccaaggtgagttcctcagctgctctcgacttacatcac
gttgtttccgtgacgacggtcaccacgacggcagaacggcagcctggaccggaacctgaa
tctgatgtgcagtccagcggcctcagcatggaggagagggagaaccaggagaaggttgaa
gatgaagaggaggaggaggaaaaggatgaagaggaggaggaggacgagtgtgtcagcgct
ctgcagcttgctaaacatttcggctgtttggcggaggaagaggaggacatctag
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integrated database retrieval system
