Syngnathus scovelli (Gulf pipefish): 125990538
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Entry
125990538 CDS
T08785
Symbol
plcb1l
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00562
Inositol phosphate metabolism
sscv01100
Metabolic pathways
sscv04020
Calcium signaling pathway
sscv04070
Phosphatidylinositol signaling system
sscv04081
Hormone signaling
sscv04082
Neuroactive ligand signaling
sscv04261
Adrenergic signaling in cardiomyocytes
sscv04270
Vascular smooth muscle contraction
sscv04310
Wnt signaling pathway
sscv04371
Apelin signaling pathway
sscv04540
Gap junction
sscv04621
NOD-like receptor signaling pathway
sscv04912
GnRH signaling pathway
sscv04916
Melanogenesis
Module
sscv_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
125990538 (plcb1l)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125990538 (plcb1l)
04371 Apelin signaling pathway
125990538 (plcb1l)
04020 Calcium signaling pathway
125990538 (plcb1l)
04070 Phosphatidylinositol signaling system
125990538 (plcb1l)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125990538 (plcb1l)
04081 Hormone signaling
125990538 (plcb1l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
125990538 (plcb1l)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125990538 (plcb1l)
09152 Endocrine system
04912 GnRH signaling pathway
125990538 (plcb1l)
04916 Melanogenesis
125990538 (plcb1l)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
125990538 (plcb1l)
04270 Vascular smooth muscle contraction
125990538 (plcb1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125990538 (plcb1l)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
125990538 (plcb1l)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
125990538 (plcb1l)
Endocytosis
Macropinocytosis
Phospholipase C
125990538 (plcb1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
125990538
NCBI-ProteinID:
XP_049613786
LinkDB
All DBs
Position
20:5905634..5977533
Genome browser
AA seq
1243 aa
AA seq
DB search
MAGAQPGVHALQLKPVSVPESLRRGNKFMKWDDDSTTVSTVTVTVDPKGYFLYWTDQNKE
TDLLDIAYIKDARNGKCTKTPKEAKLRELLDLSTLAGKMENRMLTVVSGTDMVNVTYLNF
MASQEETAKEWAEELFSLASNLLVQNMSREACLEKAYTRLKLQLNPEGRIPVKNIFRVFS
SDRKRVETALENCNLPSGRNDSIPQEDFTPEVYNLFLSNICARPELDHIFSDVGAKSRPY
LSVEQMTEFINNKQRDPRLNEILYPPLKPEQVQQLLEKYEPNATLAQNGQISVEGFARYL
NGEENSIIPPEKLDQSEDMTFPLSHYFINSSHNTYLTAGQLAGSSSVEMYKQVLLSGCRC
IELDCWKGRTTEEEPVITHGFTMTTEVSFKEVIEAIAECAFKTSPFPVILSFENHVDSPK
QQAKMAEYCRSIFGDALLTEPLEKYLLESGVPLPSPMELMGKILVKNKKKHHKASSDGSA
KKKLSEQVSNTYSDSSSVCEPSSPGAGSTKEDVTESSQPAEGTELSLRPQGRKSIGEVEA
ESEDEDDDDDDCKKGSMDEGTAGSEAFATEEMSNLVIYIQPVKFHSFEASKKTGRSYQMS
SFVETKALEQLTKSPVEFVEYNKLQLSRIYPKGTRVDSSNYNPQLFWNAGCQLVALNFQT
IDLSMQLNLGMYEYNGKSGFRLKPEFMRRPDKHFDPFTESTVDGIVANTLSVKIISGQFL
SDKKVGTYVEMDMFGLPVDTKRKAFKTKTSQGNAINPVWDEEPIVFKKVVLPTLASLRIA
VFEEGGKFIGHRIIPVSAIRPGYHYINLRNEKNQTLTLPALFVYVEVKDYVPDTFADVIE
ALSNPIRYVNLMEQRANQLAALTLEEGGDDEADREAEAGSDPPSESKTDPRAAVPAENGL
SHTPIAPPLVGHQPPSAGSLKPPVKTEDIIQSVLTEVEALTLEELKQLKGFVREQRKQYK
EMKELVRKHHRKTAELIKEHTARVSELQSQQQRRRNALHKSHKRDGKKSRSEQSLSTLDR
ELCDLDHECGQRLSELKEQQQQQLLTLRQEQYYSEKYQKREHIKQLVEKLTALAEECQSA
QLKKLRDICEKEKKDLKKKMDKKRQEKISEAKSKDKNVTEEEKLEINRSFVNEVVQYIKR
LEDAQSKRQERLQEKHKDIRQQILDERPKLQSDLDQEYQDKFRRLPVEIQEFVQDSSKAK
SGDQNPAASFSSSTTTERLNHKASQSEDDAEEASLERVYDTPL
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggctcagccaggagtccacgcgctgcagctcaagccggtgtccgtgcccgag
agcctcagacggggcaacaaattcatgaaatgggatgatgactccaccaccgtgagcacc
gtgacggtaaccgtcgaccccaaaggctacttcctctactggaccgaccaaaacaaggag
accgacttactggatatcgcgtacatcaaagatgcccgcaatggaaaatgcaccaaaacg
ccaaaggaggcaaaactgcgcgagctgctggatcttagcacgctggcgggcaagatggag
aacaggatgctgacggtggtgagcggcaccgacatggtcaacgtcacctacctgaacttc
atggcctcccaggaggagacggccaaggaatgggcggaggagcttttcagtctggcttct
aacctgctggtgcaaaacatgtccagggaggcctgtctggaaaaagcatacaccagactg
aagctccaattgaaccccgaaggtcgaatccccgtcaagaacatcttcagagtcttctcg
tccgatcgcaaacgagtggagacggcgttagaaaactgcaaccttccctccggcagaaac
gactccatcccccaagaagacttcacgccggaagtgtacaacttgttcctcagcaacatc
tgcgcccggcctgagctggaccacatcttctctgatgtgggtgcaaagagtcgcccgtac
cttagcgtggagcagatgacggagttcatcaacaacaagcagcgagacccccgactcaac
gagattctgtacccgcccctcaagcctgagcaggtccaacagctgctggaaaaatacgaa
cccaacgccacacttgcgcagaacggtcaaatctcggtggagggctttgccaggtacttg
aatggcgaggagaacagcatcatccccccagagaaactggaccagagcgaagacatgacc
tttcccctctcacactatttcatcaactcctctcataacacttacctcacagcggggcag
ctggcgggcagctcgtcggtggagatgtacaagcaggttcttctttccggctgccgctgc
atcgagctggactgctggaagggacggaccactgaagaagaacccgtcatcacccacggc
ttcaccatgacaaccgaggtctcctttaaggaggtgatcgaggccatcgcagagtgtgcc
tttaagacctcgcccttccccgtcatcttgtcttttgagaatcacgtggactcacccaag
cagcaggccaagatggccgaatactgccgctcgatatttggcgacgctctgctgacagaa
cctttggaaaagtatcttttggagtctggagttcctctgcccagcccgatggaactgatg
ggcaaaatcctggtgaagaacaagaagaagcaccacaaggcgtcgtcggacggcagcgcc
aagaagaagctatcggagcaggtgtctaacacctacagcgactcatccagcgtctgcgag
ccgtcttcgccgggagccggttccacaaaggaggacgtgactgagtcctcccagccagca
gagggcaccgagctcagcctaaggccacaaggaaggaagtccatcggtgaggtggaggct
gaaagcgaggatgaagacgacgacgatgatgattgcaaaaagggatccatggatgaaggc
acggcgggcagtgaggcgtttgccaccgaggaaatgtccaacctggtcatctacatccaa
cctgtcaagtttcacagctttgaggcttccaaaaagaccggtcgcagctaccagatgtcg
tcctttgtggagacaaaagctctggagcagctcaccaagtctccagttgagtttgtggaa
tacaacaaactacagctgagcagaatttacccaaaaggcacccgggtggactcctccaat
tacaaccctcaactcttctggaacgccggctgccagctggtggcgctcaacttccagacc
atcgatctgtccatgcagctcaacctgggcatgtacgagtacaacggcaagtcgggcttc
cggctcaaaccggagttcatgagacggcctgacaagcactttgatccgtttactgagagc
accgtggacgggatcgtcgccaacacgctctctgtcaaaatcatctcgggccagttcctg
tcagacaagaaagtgggcacctacgtggagatggacatgtttggccttcccgtggatacc
aagcgtaaagccttcaagaccaaaacgtcgcagggcaacgccatcaaccccgtgtgggac
gaggagcccatcgtcttcaagaaggtggtcctgcccacgctggcctcgctcaggatcgcc
gtctttgaagagggcgggaagttcataggacaccgcatcatacccgtctcggctatacgg
ccaggttatcattacatcaacctgaggaacgagaagaaccaaactctgacgcttcctgct
ctcttcgtatacgtggaagtcaaagattacgttcctgacacgtttgcagatgtcatcgag
gcgctgtccaaccccatccgctacgtcaacctgatggaacagagggccaatcagctggct
gctctcaccctggaggagggcggggacgatgaggccgacagggaggcagaggcgggcagc
gatcccccctcagaatccaagacggaccccagggctgccgtgccggcggaaaacgggctg
agccacaccccaatcgcccccccgctggttggacatcagcctccatctgcaggttctttg
aaaccacctgtgaagactgaagacatcatccaaagtgtcctcactgaagtggaagctctg
acgctggaagaactgaagcagctgaagggcttcgtccgcgaacagcgcaagcagtacaag
gagatgaaggagctggtgcgcaaacaccaccgcaagacggctgagctcatcaaggagcac
acggcccgagtgagcgagctgcagagtcagcagcagcgaagacgcaacgccctgcacaag
agccacaaacgagatggtaagaaaagccgctcagaacaatcgttgtccacgctggaccga
gagctctgcgatctggaccatgagtgcggtcaacgtttgtccgagctgaaggagcagcaa
cagcagcagctcctcacgctgcgtcaggagcagtactacagcgagaagtaccagaagaga
gagcacatcaaacagctggtggagaagctgacggccctggccgaggagtgtcagagtgca
cagctgaaaaaactgagagacatctgtgaaaaggagaagaaggacctgaagaagaaaatg
gacaaaaagagacaagagaagatcagcgaagccaagtccaaagacaaaaacgtcacagag
gaagagaagctggagataaacaggtcgtttgtcaatgaggtggtgcagtacataaaacgg
ctggaggacgcgcagagtaaacgacaagagcgactgcaggagaaacacaaggacatacgg
cagcagattttggatgaaaggccaaagctacagagtgacctcgaccaggagtaccaagac
aagttccgccggctgcccgtggagatccaggagttcgttcaggacagcagcaaggccaag
tctggtgaccaaaacccggccgcttctttctcttcctccacaacgacggagcggctcaac
cacaaagcgtcgcagtcggaggacgacgccgaggaagcctcgctggagcgggtgtatgac
acgcctctttag
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