Syngnathus scovelli (Gulf pipefish): 125990614
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Entry
125990614 CDS
T08785
Symbol
chrna2b
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2 isoform X2
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125990614 (chrna2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125990614 (chrna2b)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125990614 (chrna2b)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
125990614
NCBI-ProteinID:
XP_049613939
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Position
20:11403648..11435125
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AA seq
523 aa
AA seq
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MERIKRLCATLAIANWLCSLLFCQAVACHDKTHSHAEDELFKRLFAGYNKWSRPVPNISD
VVIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWQPSDYDNVTSIRVPSQLIWV
PDIVLYNNADGEFAVTHMTKAHLFHTGAVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFG
SWTYDKAKIDLERLETSVDLNNYWESGEWAIVNAVGTYNTKKYDCCHEIYPDITYFFIIR
RLPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTS
LVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPNTHKMPRWVHAVFLDLVPRWLFMRR
PAPNARRRRLLMERRRGRAVPEPSVSTSATWGKDASSRSLEDLELGTLASYVSFRPPSPQ
RPETPQQSARQPPAAARTSAIKRTAREEAPAADFPLSPSLIHALEGVHYVADHLRAEDAD
FSVKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFLPPWLAGMI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaatcaagcgcctgtgcgcgacccttgccatcgccaactggctctgctcgctg
ctcttctgtcaggcagtggcgtgccacgacaagacgcactcccacgccgaggatgagctc
ttcaagaggctgtttgctggctacaacaagtggtccagacccgttcccaacatctccgac
gtggtcatcgtcaagtttggactgtccatcgcgcagctcatcgacgtggacgagaagaac
caaatgatgaccaccaatgtttggctcaagcaggagtggaatgactacaaacttcgctgg
cagccgtcggattatgacaacgtgacctccatccgagtgccgtcacagctcatatgggtc
ccggatatcgtcctctataataacgccgacggcgagtttgcggtgacccacatgaccaag
gcgcacctgttccacacgggggccgtgcgctgggtacctccggccatctacaagagctcg
tgcagcatcgacgtcaccttcttcccgttcgaccagcagaactgcaagatgaagttcggc
tcgtggacctacgacaaagccaagatagacctggagcgcctggagacctcggtggatctc
aacaactactgggagagcggcgagtgggccatcgtcaacgcggtgggcacctacaacacc
aagaagtacgactgctgccacgagatctacccggacatcacctacttcttcatcatccgc
cgcctgccgctcttctacaccatcaacctgatcatcccctgcctgctcatctcctgcctg
accgtgctggtcttctacctgccgtccgactgcggcgagaagatcacgctgtgcatctcg
gtgctgctctcgctcaccgtcttcctgctgctcatcaccgagatcatcccgtccacctcg
ctggtcatcccgctcatcggcgagtacctgctcttcaccatgatctttgtcacgctctcc
atcgtcatcactgtctttgtgctcaacgtgcaccaccgctcgcccaacacgcacaagatg
ccgcgctgggtgcacgccgtttttctggacctggtgcccaggtggctgttcatgaggagg
ccggcacccaacgccaggcgccgcaggctgctgatggagaggcgccggggccgggcggtt
cccgagccgagcgtcagcacctcggccacgtggggcaaagacgcttcctcccgctcgctg
gaggatctggagttgggcactctggcgtcctacgtctccttccgcccgccgtcgccgcag
cggcccgagacgccgcagcagagcgccaggcagccgccggcggcggctcggacctccgcc
atcaagcggaccgccagagaggaagcccccgcggcggatttcccgctctcgccgagcctc
atccacgccctggaaggcgtgcactacgtcgccgaccacctgagggccgaggacgccgac
ttcagcgtgaaagaagactggaaatatgttgccatggtgatcgaccgcatcttcctgtgg
atgttcatcatcgtgtgcctcctgggcaccgtcggcctcttcctgcctccttggctcgca
ggcatgatttag
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