Syngnathus scovelli (Gulf pipefish): 125990648
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Entry
125990648 CDS
T08785
Symbol
esr2a
Name
(RefSeq) estrogen receptor 2a
KO
K08551
estrogen receptor beta
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
125990648 (esr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125990648 (esr2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125990648 (esr2a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
125990648 (esr2a)
Nuclear receptors [BR:
sscv03310
]
3. Estrogen like
3A. Estrogen receptor
125990648 (esr2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
125990648
NCBI-ProteinID:
XP_049614018
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Position
20:complement(8708674..8718444)
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AA seq
553 aa
AA seq
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MATDKGQPLVQLQEVDSSRVGCRILSPIHNASSPPGLSIETSQPICIPSPYTDLSHDFTT
IPFYSPTIFYAGPGLSDCSPVHQSLRPSLFWPGHGHMGPPGPLHPSQARPQQSQPGQSPW
VELSPGDCELTASKRRRSQESEEVVVSSGGKADLHFCAVCQDYASGYHYGVWSCEGCKAF
FKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEAGMTKCGMRKERGNYRNQQRR
RVSLSSHSKTNGAPALTEPAAISELNPPALTPEQLIQQIMEAEPPEIYLMKDIRRPLTEA
NVMMSLTNLADKELVHMISWAKKIPGFVELSLLDQVHMLECCWLEVLMIGLMWRSVNHPG
KLIFSPDLSLSREEGSCVQGFVEIFDMLVAATSRVRELKLQREEYVCLKAMILLNSNMCL
TSSEGSDELQSRSKLLRLLDTVTDALVWAIAKTGLTFRQQYTRLAHLLMLLSHIRHVSNK
GMDHLHCMKMKNMVPLYDLLLEMLDAHIVHSSRLPTRGSQQEATEQQEEVPTKHEGSTSA
SSNSCTTNNSDAQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggccacagacaagggtcaacccctcgttcagctccaggaggtggactccagccgagtg
ggctgccgcatcctctcccccatccacaacgcctcctccccgccgggtctgtccatcgaa
accagccagcccatctgtattccctccccttacaccgacctcagccatgactttaccacc
atccctttctacagtccaactatcttctacgctgggccagggctttcagactgctcacct
gtgcaccagtccctaaggccctccttattctggccaggtcacgggcatatgggcccgccc
ggaccgctgcacccttcccaggcacggccacagcagagccagcctggtcaaagtccatgg
gtggagttatcaccaggtgactgtgagttgactgccagcaagcgccggcgttcccaggag
agcgaggaagtcgtggtgtcatcgggcgggaaagcagacctccacttctgtgctgtttgc
caggactacgcctccggctaccattacggcgtctggtcttgtgaaggatgcaaggccttc
tttaagaggagcattcaaggtcataatgactacatctgcccggcaaccaatcagtgtacc
atcgacaagaaccgtcgtaagagctgtcaggcgtgccgtcttcgcaagtgctatgaagct
ggcatgactaaatgtggcatgcgcaaagagcgtggaaactacaggaaccagcagagacgc
cgcgtgagcttgtcctcgcacagcaagactaacggagcaccggcgttaacggaaccggcg
gccatttccgagctcaacccgcccgctttgaccccggagcagctaatacagcaaataatg
gaggcggagccacctgagatttacctgatgaaggatataaggagaccactcaccgaagcc
aacgtcatgatgtcgctgactaacctcgctgataaggagctggttcacatgatcagctgg
gccaagaagatcccagggtttgtggagctcagtcttctggaccaggtgcacatgttggag
tgctgctggctggaggtgctaatgataggactgatgtggaggtcagtcaaccatccaggg
aaactcatcttctcacctgacctcagtctgagcagagaagagggcagctgcgtccagggc
tttgtggagatctttgacatgctcgtcgccgccacatccagggtgagagaactcaagctg
cagagggaggagtatgtctgcctcaaggccatgatcctccttaactccaacatgtgcctc
acctcttctgagggcagcgatgagctgcagagccgctccaagctgctccgtcttctcgat
accgtgacggacgccctcgtgtgggctatcgccaaaaccggcctcacgttccgccagcag
tacacccgtctggctcacctgctcatgctgctctcacatatccgccatgtcagcaacaag
gggatggaccatctccactgcatgaaaatgaagaacatggtgcctttgtacgacttgctg
ttggagatgttggacgcccacatcgtgcacagctcccggctgcccaccaggggttcgcag
caggaggccacggagcagcaggaggaggttcccaccaagcatgaaggttccacaagcgcc
tcctcaaatagctgcactaccaacaacagtgatgcccagtag
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