Syngnathus scovelli (Gulf pipefish): 125990867
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Entry
125990867 CDS
T08785
Name
(RefSeq) plastin-3 isoform X1
KO
K17336
plastin-3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125990867
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125990867
04147 Exosome [BR:
sscv04147
]
125990867
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
Check point factors
Other check point factors
125990867
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
125990867
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125990867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
CAMSAP_CH
EF-hand_8
EF-hand_STIM1
EH
Motif
Other DBs
NCBI-GeneID:
125990867
NCBI-ProteinID:
XP_049614136
LinkDB
All DBs
Position
1:complement(21199687..21205953)
Genome browser
AA seq
686 aa
AA seq
DB search
MGETRRRECEVRFKRKDSTDGWSYFSRRRAVSAEENRSLPQADTARTSLPGGFNFTQSLV
GLQVRGVTMSQEINAEEMEEIREAFQKVDVDSNGYICIKELGNLFREVGFSVPGFQLREI
IQKLDRDKDGHINLEEFTSLFKELKNDRIAQGFRNALNRKEGIVAIGGTSEISSEGTQHS
ISEQERYAFANYINSTLEKDLDCQHVLPINPNTGALFKALADGILLCKLINQSVPETIDE
RTINTKKLTAFTTQENLNLALNSASAIGCQVVNIGAQDLKEGKPHLALGLLWQIIKIGLF
ADIELSRNEAIAALLLEGETLEELMKLSPEELLLRWANFHLKNVGMTLSNFSGDIKDSKA
YFHLLEQIAPDGSKEDVERVEIDMTGLYEKDLTKRAELMLQQADLLGCRQFVTATDVVSG
NSRLNMAFVATLFNKHPALTKPENQDWNLESETREERTFRNWMNSQGVTPYVHHIYGDLH
DALVILQLYEKCKVPVDWNRVNKPPFKAGSGHLKKIENCNYAVHLGKKGAGFSLVGIAGQ
DLHDGNSTLTLALVWQLMRRYTFNLLEDLGDGDVAGEDLIITWVNKTLSEADKTSSIKSF
KDRSLNTSLPVLDLIDAIQPGSVNFELVLKENLTDEDKLKNAKYAISMARKIGAKVYALP
EDLVEVNPKMVMTIFACLMGRGMKRV
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaacaaggaggagggagtgcgaggttcgatttaaaagaaaagatagcacggat
gggtggagctacttttctcgccgccgggcggtgtcggctgaagaaaaccggtcgcttcct
caagctgacacagcaaggacttctctcccagggggatttaattttactcagtcacttgtc
ggacttcaggtaagaggcgtcacaatgtcgcaggagataaatgccgaggaaatggaggag
attagagaggccttccagaaagtagacgtggacagcaatggatacatctgcatcaaggaa
cttggtaatctctttcgtgaggttgggttttctgtacctggcttccagctccgggagatc
atccaaaaacttgaccgagacaaagacggccacatcaaccttgaagaattcacctctcta
ttcaaggaattaaagaacgaccgcattgcccaagggttcagaaatgctctcaacaggaaa
gaaggcattgttgccattgggggcaccagtgaaatttcaagtgaaggaacacaacattca
atttctgaacaagagcgctatgcctttgcaaattacatcaactctactttggagaaggat
ctcgactgccaacacgtgctgcccatcaacccaaacaccggagctctattcaaagcgctg
gctgatggcatcctcctttgcaaactcatcaaccaatctgttcccgagaccattgatgag
cgaaccatcaatacaaagaaactcactgcattcactacgcaggagaatctcaatttggct
ctgaactcagcctcggcaatcggctgccaagttgtcaacattggggctcaagatctgaaa
gagggaaaacctcatctggccctcgggctcctctggcaaattataaagatcggactcttt
gcagatatcgagctgagccgtaatgaagccattgcggcactgctgctagagggggagact
ttggaggagttgatgaaactcagcccagaggagttgttgctacgctgggccaatttccac
ctgaagaatgttggcatgaccctgtcaaacttttcaggggatattaaggactccaaggcg
tatttccacctactggagcagatcgcgccagatggcagcaaagaggacgttgagcgagtt
gaaattgatatgactggactttatgagaaagatctcacaaagagagcagagcttatgttg
cagcaagccgaccttcttggctgtcgacagtttgtgacagctaccgatgtcgtgtccgga
aactccaggctcaacatggcctttgtggccacgctcttcaacaaacacccggctctgacg
aaaccagagaaccaagactggaatcttgagagtgagaccagagaggagaggacattcagg
aactggatgaattcccaaggggtcaccccatatgttcaccacatctatggtgatctgcac
gatgccttggttattctccaactatatgaaaaatgtaaggttccagtggactggaacaga
gtcaacaagcctccattcaaggccgggtcaggccatttgaaaaagatcgaaaactgtaac
tacgctgtgcatctgggaaagaaaggagctggtttctcgctagtgggaatcgcaggacag
gatctccatgatggaaattccactctcacccttgcgctagtgtggcagctgatgagaagg
tacacgtttaatctgctcgaagacctcggggatggagatgtggctggagaggatttaata
atcacatgggtgaacaaaactttgtctgaagctgacaagacgtcctctatcaaaagcttc
aaggacaggtcactcaatactagccttccagttttggacctaatcgatgccatccaaccg
gggagtgtgaactttgagctggttctaaaagaaaatctcacagatgaggacaaactcaag
aatgccaagtatgctatttctatggcaagaaagattggcgctaaagtgtacgccctgccg
gaggacttggtagaggtcaatcccaaaatggtgatgaccatcttcgcctgcctgatggga
agaggcatgaaaagggtataa
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