Syngnathus scovelli (Gulf pipefish): 125990905
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Entry
125990905 CDS
T08785
Symbol
eif3c
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C isoform X1
KO
K03252
translation initiation factor 3 subunit C
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sscv03012
]
125990905 (eif3c)
Translation factors [BR:
sscv03012
]
Eukaryotic type
Initiation factors
eIF-3
125990905 (eif3c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-3c_N
PCI
EIF3CL_C
MID_pPIWI_RE
DUF2779
NPR3
Motif
Other DBs
NCBI-GeneID:
125990905
NCBI-ProteinID:
XP_049614214
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All DBs
Position
21:complement(6753302..6758814)
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AA seq
923 aa
AA seq
DB search
MSRFFATGSDSESEESSSADEIAPKAPGTTLKQSLLLSDDEEDTKRVVRSAKDKRFEELT
NLIKTIRNAMKIRDMAKCLEEFEQLCRAFLKSKNIVDKEGVPPFYIRLLADLEDYLNQLW
EDKEGKKKMNKNNAKALSTLRQKIRKYNRDYETEITAYKENPQESADEEEDKGPDDSGSS
SDSDGDDDGVSAKNFLKKKPEATPEASKFLKKGSGDESSSSDDDEDDEDWGSDTVDSGSE
SSDDGEDKGASLAMVFLKKAQAPEKSGEKLGKKKKLKKKEKLEEEAEEEGGEEVEGGWEK
VKGGVPLVKEKPKMFAKGTEINTVVVVKKLHEILQARGKKGTDRTGQIELLHALAAIALE
HNLGVGVLVKIKFNIVASLYDYNPNMATYMKPEMWKKCLDCIDELLDILYDNNDMFIGEN
IAEESENLAISDQPFRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVDNLKDEGHVCGIM
DRLLTYLENKGTTEEICRIYLHRIMHTYYKFDYKAHRRSLGIQAETKSQQDQEESEGEDS
AIIMDRLCKFIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQHADPP
VQILYNRTMVQLGICAFRQGMIKDAHNALLDIQSSGRAKELLGQGLLMRNMQERNAEQEK
IEKRRQVPFHMHINLELLECVYLVSAMLLEIPYMAAHEFDARRRMISKQFHHQLRVGERQ
PLLGPPESMREHVVAASKAMKMGDWRTCHSFIINEKMNSKVWDLFPETQRVREMLVRKIQ
EESLRTYLFTYSSVYDSISMATLSDMFELEIATVHSIISKMIINEELMASLDQPTQTVVM
HRTEPTSLQNMALQLAEKLGSLVENNERVFDLKQGVYGGYFNRDQKGGYQQKQSYQRDGG
KGGYQSKQGGYQRGYRNQNQGNY
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtttcttcgccaccgggtctgacagtgagtcagaggagtcctcatcagccgat
gagatcgcccctaaagcgcccgggacaacgctcaagcagtcgctcctgctcagtgatgat
gaggaggacaccaaaagagtcgtgcgcagtgccaaagacaaaaggtttgaggagttgacc
aatctcatcaagactatccgcaatgccatgaagatccgcgacatggccaagtgtctggag
gagtttgagcagttgtgtcgagcgttcctcaaaagcaagaatatagtggacaaagaggga
gttccacctttctacatccgtctgttggcagacctggaggactacctgaatcagctttgg
gaggacaaagagggcaagaagaagatgaacaagaacaatgcaaaagccctcagtacactg
cggcagaagatccgcaagtacaaccgggattacgagacggaaattactgcttacaaggag
aatccacaggaatctgcagatgaagaggaagacaagggcccagatgattcagggtcgtcc
tctgacagcgatggggatgatgatggtgtgtctgctaaaaacttcttgaagaaaaagcca
gaggccacaccggaagctagcaagttcctcaagaaaggatctggggacgagtcttcctcc
agcgacgacgatgaagatgatgaagactggggctcagacaccgtggactcgggcagtgag
agctctgacgacggcgaggacaagggcgcgtctctcgccatggtcttcctcaaaaaggct
caggcgcccgagaagagcggcgaaaagctggggaagaagaagaagctgaagaagaaagag
aagctggaggaggaggctgaggaagagggaggcgaggaggtggagggaggctgggagaag
gtcaagggaggcgtccctctcgtcaaggagaagcccaagatgtttgcaaagggaactgag
atcaacacagttgtggtggtgaagaagctccacgagatcctgcaagccagaggcaaaaag
ggcaccgaccggactggccagattgaactgctccacgccctcgccgccatcgctctcgag
cacaacctgggtgtgggcgtcctggttaaaatcaaattcaacatcgttgcgtcgctctac
gattacaaccccaacatggcgacttatatgaagccggaaatgtggaagaagtgtctggac
tgcatagacgagctgctggacattctgtatgacaacaatgacatgttcattggggagaac
attgcggaggaaagtgagaacttggccatctcagatcagcctttcagggttcgcggctgc
attttaactttggtagagaggatggacgaagagttcaccaagatcatgcagaacacggat
cctcattcgcaagaatacgtggacaatctgaaagacgaagggcacgtgtgcggcatcatg
gaccgcctgctcacatacttagagaacaagggcaccacggaggagatttgccgcatctac
ctgcacagaatcatgcacacgtactacaaatttgattacaaggctcaccggcgcagcctg
ggcatccaggcagaaacaaagtcccaacaggaccaagaggagagcgagggcgaggacagc
gccatcatcatggaccgcctgtgcaagtttatctacgccaaggaccgcaccgaccgcatc
cgcacgtgcgccatcctctgccacatttaccaccacgcgctgcactcgcgctggtaccag
gcccgcgacctgatgctcatgagccacctgcaggacaacatccagcacgccgacccgccc
gtgcagatcttgtacaacagaaccatggtccaactgggcatctgcgccttccgtcaaggc
atgatcaaagacgcccacaatgctttgctggacatccagtcatcgggccgtgctaaggag
ctgctggggcaaggtttgctcatgaggaacatgcaggagaggaacgccgagcaggagaag
atcgagaagcgaagacaagtgcccttccacatgcacatcaacttggagctgctggagtgc
gtgtacctggtgtcggccatgttgttggaaatcccctacatggccgcccacgagtttgac
gcccgccgccgcatgatcagcaagcagttccatcatcagctgcgagtgggagagcgacag
ccgctactcggcccccccgagagcatgcgcgagcatgtggtggcggccagcaaggccatg
aagatgggcgactggcgcacctgccactccttcatcatcaatgagaagatgaacagcaaa
gtgtgggacctgttccccgagacgcagcgagtgcgcgagatgctcgtcaggaagatccaa
gaggagtcgctgaggacgtacctcttcacgtacagcagtgtgtacgactccatcagcatg
gcaacactatctgacatgtttgagttggagatagcaacagttcacagcatcatcagcaaa
atgatcatcaacgaggagcttatggcctctctggaccagcccacgcagactgtggtgatg
caccgcacggagcccacctccctgcagaacatggccctgcagctggccgagaaactgggc
agcttggtggagaacaacgagcgcgttttcgatctcaagcagggcgtctacggcggatat
ttcaacagagatcagaaaggcggataccaacagaaacagtcgtaccagagagacggcggg
aagggcggttaccagtccaaacagggaggctaccagcgaggctacagaaatcagaaccaa
ggcaactattga
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