Syngnathus scovelli (Gulf pipefish): 125990925
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Entry
125990925 CDS
T08785
Name
(RefSeq) paired box protein Pax-2a isoform X1
KO
K15608
paired box protein 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125990925
04131 Membrane trafficking [BR:
sscv04131
]
125990925
03036 Chromosome and associated proteins [BR:
sscv03036
]
125990925
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125990925
Membrane trafficking [BR:
sscv04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
125990925
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
125990925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
125990925
NCBI-ProteinID:
XP_049614278
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All DBs
Position
21:6711892..6728174
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AA seq
400 aa
AA seq
DB search
MLGCRCVCAAVVSHVGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLA
EGICDNDTVPSVSSINRIIRTKVQQPFHPSPDGTSLSTPGHTIVPNTVSPPVTSASNDPA
GSYSINGILGIPRSNGEKRKRDEDGSDGSGPNSDSQGSVESLRKHLRADAFTQQQLEALD
RVFERPSYPDVFPTSEHVKPEQANEYSLPSLNSSLDEVKPSLSSNANPELGPSVSQSYPV
GRDMANTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTTYNEAWRFSNP
ALLMPRREAPSRPLLPLPMTATSYHGNQINLQDRRLSLHI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttaggctgccggtgtgtgtgtgctgctgttgtctcccacgtagggcacgggggtgtg
aaccagctcggcggggtgttcgtcaacggaaggcccctcccggacgtggtgcgccagcgc
atcgtggagctggcccaccagggggttcgaccgtgcgacatctctcggcagctgcgcgtc
agccacggctgcgtcagcaagatcctcggcaggtactatgagactggtagcatcaaaccg
ggcgtgatcgggggctccaagcccaaagtggctacgccaaaggtggtggacaagattgcg
gactacaaaaggcagaaccccaccatgtttgcctgggagattcgtgacaggctgttggct
gaaggcatctgcgacaacgacaccgtgcccagtgtctcctccattaaccggatcatccga
acaaaagtacagcagcccttccatccgtcgcccgatgggacgtccctgtcgacgccaggc
cataccatagtgccaaacacagtttctccgccagtaaccagcgcctccaacgaccctgcg
gggtcctactccattaacggcattctgggtattccgcgatccaacggtgaaaagaggaaa
agagatgaagatggttcagatggttctggtccaaacagtgattctcagggtagtgtggag
agtttacggaaacacctgagggccgacgccttcacccagcagcagctggaagccctggat
cgggtctttgaacgcccctcgtacccggacgtcttccctacatcggagcacgtcaaaccg
gaacaggctaatgagtactcgctgccgagcctcaattccagcctggacgaagtcaagccc
agtttgtcgtccaacgccaacccggagctgggccccagcgtgtcgcaaagctaccctgta
ggtcgagacatggccaacacgacattacccgggtacccccctcacgtcccccccacaggc
cagggcagctacccgacttccacgctggctggaatggttcctgggagtgagttttcgggg
aacccctacagtcatccacagtacaccacctacaacgaagcttggcgattcagcaatccg
gcgttactaatgccgcgtcgagaggctccgtcgcgcccgctgctgccgctgcctatgacc
gccactagttaccatggaaaccaaatcaacctgcaggaccgccgcctcagcctccatatt
tga
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