Syngnathus scovelli (Gulf pipefish): 125991022
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Entry
125991022 CDS
T08785
Symbol
pgap3
Name
(RefSeq) post-GPI attachment to proteins factor 3
KO
K23553
post-GPI attachment to proteins factor 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
sscv01100
Metabolic pathways
Module
sscv_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
125991022 (pgap3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125991022 (pgap3)
Membrane trafficking [BR:
sscv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
125991022 (pgap3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Per1
Motif
Other DBs
NCBI-GeneID:
125991022
NCBI-ProteinID:
XP_049614466
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All DBs
Position
21:complement(8562043..8565784)
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AA seq
353 aa
AA seq
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MPLSPRRAFVSATAGPRSTTTTMASPRPPRCTSGRAASVVVVVLLISATTVVGSQGDKDS
VYRDCVSQCVQSNCTGVRLRWYQAVQPQYMALTGWTCRDDCRYECMWTTVGLYQAGGYEV
PQFHGKWPFTRFLCFEEPASALASLLNGLACLLMLLRYRSTVPRQSPMFHTINAFSLVSL
NAWFWSTVFHTRDTFLTEKMDYFCATAVILYSIYLCCVRTLGLKHPWVSSIMGVVLILAF
TSHISYLTFVRFDYGYNMAANTFFGMVNLLWWLCWCWSNRRTLPYWWKCGLVVVLLHGLA
LLELLDFPPYRWVLDAHAIWHLSTIPVHFLFYSFLIDDSLYLLNTEKLGVKFE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgccattgtcgcctcgccgtgcctttgtgagtgccaccgccggtccaagatccactacc
acgaccatggcctcgccgcgccccccccgctgcacatctggcagagcggcctcggtggtg
gtcgtcgtgctgctcatatcggcgaccaccgtggtgggctcccagggtgacaaagactcg
gtgtaccgggactgtgtgagtcagtgtgtccaaagcaactgcaccggagttcggttacgg
tggtaccaggcagtccagccgcagtacatggcgctgacaggttggacttgtcgagacgac
tgtcgctatgagtgcatgtggaccaccgttggtctttaccaggctggaggctacgaggtc
ccgcagttccacggcaagtggccgtttacacgcttcctgtgcttcgaggagccggcgtcc
gccctcgcctctctcctgaacggcctggcgtgccttctcatgctgctgcgctaccggagc
accgtgccacggcagagccccatgttccacaccatcaacgccttctctctggtgtcgctc
aacgcctggttctggtccacagtgttccacactcgcgacaccttcctcactgagaaaatg
gactatttctgtgctactgcagtcattctctactccatttacttgtgctgcgtcagaacg
ttggggctgaagcacccgtgggtgtccagcatcatgggggtggtgctcatcttggcattc
acgtcacacatttcctacttaacctttgtccgtttcgactatggctacaacatggccgcc
aacaccttttttggcatggtgaacctgctgtggtggctgtgctggtgttggagcaaccgg
cggacgctgccgtactggtggaagtgtggcctggtggttgtgctgcttcacggcctggcc
cttctggagctgctggacttcccgccttatcggtgggtcctggacgcgcatgccatttgg
cacctgagcaccatccccgtgcacttccttttctacagtttcctgatcgacgacagcctc
tacctgctcaacaccgagaagctgggcgtcaagttcgagtag
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