Syngnathus scovelli (Gulf pipefish): 125991104
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Entry
125991104 CDS
T08785
Symbol
si:dkey-220f10.4
Name
(RefSeq) tubby protein isoform X1
KO
K19600
tubby and related proteins
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125991104 (si:dkey-220f10.4)
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125991104 (si:dkey-220f10.4)
Cilium and associated proteins [BR:
sscv03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125991104 (si:dkey-220f10.4)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Other domain-containing proteins
Tubby family proteins
125991104 (si:dkey-220f10.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
Tub_N
Motif
Other DBs
NCBI-GeneID:
125991104
NCBI-ProteinID:
XP_049614631
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All DBs
Position
21:complement(3112737..3115776)
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AA seq
540 aa
AA seq
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MEDPDIRQQKLDNQRSILLKKQQNKRADCQMVVANRDARQKNRRQKGRSDETALLISRSL
SNISLSDQVEHAHDNPIDVITLAEGEDDDAEAATVSGEVVAERPFAPKKLNLDTEQDGNE
TEDNDVGVEGQKTKNREKDKPEEDNDGREKKTKRKDKAKERNDGQKSSKMTKQERKKKHS
HDTSASKSKSPKKNGRHESADEEEDECPTPSRDTSRRKHLDTSRCQISDDSKDEDVQTEA
KERKKKRGEKNTPSLASLNSNYKESSSSGGSQSTNGTVSPVSLEDLEAFSLRPAPRDVTI
QCRVTRDRRGMEKGMYPTYYLHMEKEDGKRMFLMAGRKRKRSKTSNYLISTDPTNLSRDT
SCYIGKLRSNVLGTKFIVYNGGENPEKKPFIKECESVRQELAAIFYETNVLGFRGPRKMT
VIIPGMLENDERVAIQPKNEQETLLARHASNNTDKLVTLVNKCPSWNEQTQSYVLNFHGR
VTQASVKNFQIIHPENGDYIVMQFGRVSEDVFSMDYSFPMCALQAFAVTLSSFDGKLACE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggaggatccggatatacggcagcagaaattggacaatcagcgatctattttgctaaag
aagcaacaaaataagcgtgccgattgtcaaatggtggtcgctaaccgggacgcccgccag
aagaaccgcagacaaaaaggccgctcggacgagacggcgctgctgatcagccggtccctg
agcaacatctccctgagcgaccaagtggagcatgcgcatgacaacccgatagatgtcatc
acgctggcggagggggaggatgacgacgcagaggccgccaccgtgtcaggtgaggtggtt
gcagagaggccgttcgctcccaaaaagctcaacttggacacggagcaagacggaaacgaa
acggaggacaacgatgttggcgtggaaggccagaagaccaagaacagagagaaagacaaa
cccgaggaggacaatgatggccgggagaaaaaaacaaaacggaaagacaaagccaaagag
cgcaacgatggacagaagagcagcaagatgacaaaacaggagcgcaaaaagaagcactcg
cacgacacgtcggcttcaaagtcgaagagtcccaagaaaaacggacgccacgaaagcgct
gacgaagaggaagacgagtgcccgacaccatcccgtgacacttctcggaggaaacatctg
gacacgtccaggtgccaaataagcgacgacagcaaggacgaagacgttcaaacggaagcc
aaagaacgaaaaaagaagaggggagaaaaaaacaccccgagcttagcctctctcaactcc
aactacaaggagagctcatcttcgggcggcagccaatccactaacggaacggtttctcct
gtatcgctggaggacctcgaggccttctccttgcggcccgcccctagagacgtaaccatc
cagtgtcgggtcaccagagacaggagaggcatggagaagggcatgtaccccacttactac
ctacacatggagaaagaggatggaaagaggatgttcctaatggcgggccgtaaaaggaag
aggagcaaaacatccaactatctcatctcaacagatcctaccaatctgtcccgagacact
agctgctacatcggaaagctaaggtccaacgttctgggaacaaagttcatcgtatacaac
gggggagaaaacccggagaaaaagcctttcattaaagaatgcgaatctgtgagacaagag
ctggccgccattttttacgaaactaacgttctgggattccggggtcctcgtaaaatgacg
gtgattatcccgggaatgctggagaatgacgagagggtggccattcagcccaaaaatgaa
caggaaaccctgctagcgcgccacgctagcaacaacacggataagctagtgaccctggtc
aacaaatgtcccagctggaatgagcagacgcagtcatacgtgctcaacttccacggccgc
gtcacgcaagcctccgtgaaaaacttccaaatcatccacccggagaacggcgactacatc
gtgatgcagttcggtcgcgtttccgaggacgtcttctcgatggattacagcttccccatg
tgcgcccttcaggccttcgccgtcacgctctcgtcttttgacggcaaactggcctgcgag
tga
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