Syngnathus scovelli (Gulf pipefish): 125991164
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Entry
125991164 CDS
T08785
Symbol
tut1
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125991164 (tut1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
125991164 (tut1)
2.7.7.52 RNA uridylyltransferase
125991164 (tut1)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
125991164 (tut1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
RRM_1
RL
zf-met
RRM_PARP14_3
zf-C2H2_jaz
RRM_DEAH11
TUTase
RRM_7
zf-C2H2_2
DUF7066
CILP_C
Motif
Other DBs
NCBI-GeneID:
125991164
NCBI-ProteinID:
XP_049614738
LinkDB
All DBs
Position
21:complement(6127720..6133201)
Genome browser
AA seq
782 aa
AA seq
DB search
MESKSDIKTTPRGFHCVLCNVNLPNQSSVDQHVKGRKHQTLSNVRTTRKTQEQHSVFVSG
IKPEISEADLVDYFQQFGAVSDVIVDKDKGVFAIVQFNQTESIQATLSCVEHKMKGLKLR
VKPREKKEFKYIPKNKCDMQNLQQVLDHLKPQLCQLPSVNAQMQYIEDRFQLADTEKKAR
NLLAQLLQEVFVEFFPDSQILPFGSSVNTFGIHACDLDLVLDLENTKVFQARAKCTSEAV
ECMSDDGHSEDSILSDIDLSTASPAEILDLVATILRRCVPSVHKVHVVSSARLPVVKFHH
RELNLQGDITINNSLAVRNTRFLQLCSGIDERLRPLVFTIRYWAKQNQLAGNPSGSGPLL
NNYALTLLVIFFLQNCEPPVLPTVERLKDMACEEEECVIEGWNCTFPSQPIAVPPSGNSQ
DLCTLLAGFFSFYAKFDFASSVISLREGHAIPVTDFSHKNTEEENPTKRGPKLGPLNVLD
PFELSHNVAGNLNERSQRCFQKACQDAEKYCRSLQYLQKSTKGKSWGLVRLFTPSGGVAQ
TKEDELKISIPFKPSTLPKALRTAKDDFRPVWFEKVCAAVEQIFQSVLRCDLTVSSGFGF
SGDSAADVSAEMETSSDSLNTSVNGSMEHPAAVGAKRRLSAADDDMPVSPQGKKPRMSKR
GKPYWLWGQKHAVWAGRRKVRRELIKDTDLRPEGSCMQLEAQVTDRIIEKEVALERPLEF
KIQPHMVGEAESTKVVLSLEPCSDPAGVFQDLVHFLEVFLPKMVESLLEKEAEEAEKMGH
HC
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggaatccaaaagtgacattaaaacaacgccgaggggctttcactgtgtcttatgcaac
gtcaacctaccaaaccaatcaagcgtggatcagcatgtcaaagggcgaaagcaccaaaca
ttaagcaatgtgcgaaccaccaggaagacccaggagcagcacagcgtctttgtcagcggc
ataaaaccggagatctcagaggctgacctggtggactacttccagcaatttggagccgtt
tccgacgttatcgtggacaaagacaaaggtgtgtttgccattgtgcaattcaaccagaca
gagagcattcaggctaccttgtcctgtgtcgagcacaaaatgaaaggtctcaagctgcgt
gtcaaaccccgggagaagaaggaattcaagtacattcccaaaaacaagtgtgatatgcag
aacttgcagcaagttctggatcacctaaaaccacaactctgtcagcttccttctgttaat
gctcagatgcagtacattgaggaccggttccagcttgcagatactgagaagaaggctcga
aacttgctggcgcaactcttgcaggaggtctttgtggagttttttccagatagccagatt
ttgccgttcggctcttctgtcaacacgtttggcattcacgcctgtgacctggacttggtt
ctggacttggagaacacaaaagtcttccaggcccgtgccaagtgtacatcagaggcagtc
gagtgcatgtcagacgatggccactcggaggactccatcctgtctgacatcgacctgtcc
acggcctcccccgctgagattctggacctggtggcgaccatcttgaggcgctgcgtgccc
agtgtgcacaaagtccatgtggtcagcagtgcccgcctcccggtggtcaaatttcatcac
cgcgagctcaacttgcaaggggacatcacgatcaacaacagtctggccgtaaggaacacc
cgcttccttcagttatgctcaggaatagatgagagactaaggcctctggtgttcacaata
cgctactgggccaaacagaaccaactggcaggtaaccccagcggttccggtccactgctc
aacaactatgctttgacgctgctcgtcatcttcttcctgcaaaattgtgagcctcccgtt
ctccccactgtggagcgcctcaaagacatggcctgtgaggaagaggaatgtgtgattgaa
ggatggaactgcaccttccccagtcagcccatcgcggtgccccccagtggaaacagccag
gatctctgcacccttttggctggtttcttctccttctatgccaagtttgattttgcaagt
agtgttatatcgttgcgggaggggcatgcaatcccagtcacagactttagtcacaaaaat
accgaggaggaaaaccccaccaagcgtggacctaaactgggccccctcaatgttttggat
ccctttgagctttcccacaacgtagcagggaacttgaatgagcgctcccagagatgtttc
cagaaggcttgccaggacgccgagaagtactgccgcagcctccagtacttgcagaagtcc
accaaaggaaagtcctggggccttgtgcgtttattcacccccagcggcggagtggcgcaa
accaaagaagacgagctgaaaatcagcattccgttcaaaccatccacacttcccaaagcc
ctccgcacggccaaagatgatttccgcccggtgtggttcgaaaaggtgtgcgctgctgtg
gagcagatcttccaaagtgtcctcagatgtgacctcaccgtctcatcgggctttggcttt
tctggggattcggccgcagacgtctcagcagaaatggagaccagttcagactccctcaac
acgtcggtaaacggcagcatggagcatcccgccgcggtaggcgccaagcggcgactctct
gctgccgacgacgacatgccggtttcccctcaaggcaaaaaaccgaggatgtccaaaaga
ggcaagccctactggctgtggggccagaaacacgccgtgtgggccggcaggagaaaagtc
cggcgcgaactcatcaaagacaccgacctgaggcccgaaggcagctgcatgcagctcgag
gcccaagtcacagatcgcatcattgagaaagaagtggcgctcgagagaccgctggagttc
aagattcagccccacatggtgggtgaggcagaaagcacaaaggtagtgttgagcttggag
ccgtgcagcgacccagctggagtttttcaggacttggtacattttcttgaagttttcctt
cccaagatggtggagtcgctgctggagaaagaagctgaagaagcggagaaaatgggacat
cactgttaa
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