Syngnathus scovelli (Gulf pipefish): 125991191
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Entry
125991191 CDS
T08785
Symbol
tcf7l2
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K04491
transcription factor 7-like 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04310
Wnt signaling pathway
sscv04520
Adherens junction
sscv04916
Melanogenesis
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125991191 (tcf7l2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125991191 (tcf7l2)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
125991191 (tcf7l2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125991191 (tcf7l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125991191 (tcf7l2)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
125991191 (tcf7l2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125991191
NCBI-ProteinID:
XP_049614811
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All DBs
Position
21:3854226..3923323
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AA seq
624 aa
AA seq
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MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENLSAERDLADVKSSLVNESETNQNSSS
DSEAERRPPPRSETFRDKTRESLEEAAKRQDGGLFKSPPYPGYPFIMIPDLSSPYLPNGS
LSPTARTYLQMKWPLLDVQPGGLQSRQALKDARSPSPAHIVGPFCWEFPGQSDLSLHQFH
LSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLQTDVDPKTGIPRPPHPPDISPYY
PLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSSLLSSRFPPHMV
PPHHGLHTTGIPHPAIVTPNVKQESSHSDISSLNSSKQSDAKKEEEKKKQVHIKKPLNAF
MLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW
SARDNYAANQQGKRKKRKREKQQAESNEHREYFPNPCLSLPPITDLSAPKKCRARFGLDQ
QNNWCGPCRRKKKCIRYIQGEGSCASPPSSDGSFPDSPPSSPSSVVPSPSPKESKPQTEQ
MQPLSLTMKAAHQPLLAHPHLLAGPPENLSTAALSGKTLAPEPGEVPPSRLPGPSVVSPM
ARPSPLLCHSHSLQPLSLVTKSIE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaacttaacggcggtggaggggacgacctgggcgccaacgatgagatgatctcc
ttcaaagacgaaggggagcaggaggagaaaatctcagagaacttgtcggccgaaagggat
ttagcggacgtcaagtcgtcgctcgtcaacgagtcggaaacaaatcagaacagctcgtcc
gactcggaggcggagagacggcctccgccgaggtctgaaactttcagagacaaaacgcga
gaaagtttagaggaagcagcgaaaaggcaagatggagggctgttcaagagcccaccgtac
ccgggctacccgtttattatgatccccgatctcagcagcccctacctccccaacggatca
ctttcccccacagcacgcacatacctccagatgaaatggcccctgctagatgttcaacca
ggaggtcttcagagtagacaagcacttaaagatgccaggtccccgtcgccggcgcacatt
gttgggcccttctgctgggaattccctggacagtcagatctgagccttcaccaatttcat
ttgtcgaataaggttccagtggttcagcaccctcaccacgtgcaccctctcacaccgctg
atcacctacagcaatgagcacttcacacccgggaacccaccaccacacctacagacagac
gtggaccccaaaacaggaattccaaggcctccacatcctccagatatttctccttattac
cctctgtcacctggcaccgtcggccagattccccatcccctaggatggttagtaccacag
caaggtcaacctgtttatccaatcacgacagggggctttagacacccctacccgactgcg
ctcactgtcaacgcatccatgtcaagtcttctgtcctctaggttccctccacacatggtg
cccccccatcacggtttgcacaccaccggcatcccgcacccggccatcgtcacgcccaac
gtcaagcaggaatcctcacacagcgacatcagctccctcaacagttcgaaacagtcggat
gcaaaaaaggaagaagagaagaaaaagcaggtgcacataaagaagccgctcaacgccttc
atgctctacatgaaggagatgcgggccaaggtggtagccgagtgcacgctgaaggagagc
gccgccatcaaccagattctgggtcggaggtggcacgcgctctccagggaggagcaggcc
aagtactacgagctggccaggaaagaacgacagctccacatgcagctctaccccggctgg
tcggcccgagacaactatgcggctaaccaacaggggaaaaggaagaagagaaaaagggaa
aagcagcaagcggagagcaacgaacacagagaatattttccaaacccttgcctttcactc
cctccgattacagacctgagcgctcctaagaagtgtcgagcgcgctttgggctcgaccaa
cagaataactggtgcggtccgtgcaggaggaaaaaaaagtgcattcgctacatccaaggt
gaaggcagctgcgccagtcctccctcctcggacggaagcttcccagactcccccccgtcc
tcgccctcctccgtggtcccgtccccctcgccaaaagagtccaaacctcagactgaacaa
atgcaacctctctcactgactatgaaagccgcccaccagccgctcctcgctcacccgcac
ctcctggccgggccgccggaaaacctctcgacggcggcgctgagtggcaaaacgctggcc
ccggagcccggcgaggtcccgccctcgcggctaccgggcccctcggtggtgtcccccatg
gcccggccctcgccactgctgtgtcattcccactcgctgcagccgctgtcgcttgtgacc
aagtctatcgagtag
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