Syngnathus scovelli (Gulf pipefish): 125991193
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Entry
125991193 CDS
T08785
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125991193
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
125991193
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Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
ig
Ig_2
fn3
V-set
LRR_14
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
125991193
NCBI-ProteinID:
XP_049614854
LinkDB
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Position
21:complement(4056608..4059601)
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AA seq
576 aa
AA seq
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MDGFCVAFGISFLLYIITPGSSTCLKGCSCVDETLGRSLLCMETYMGQIPEDIPHNFTKI
RMENCHLTELPPGSFSKLGTLEFLWLNFNDITLMNIKSLQGLANLTELRLQGNKLTSVPW
TAFQDTPRLKILDLKHNRLDVLPEYSLKHLPVLTYLDLSFNQLSVISKDVFMNWPLYQKA
ERVWAKEGSVSNVVLALHDNPWLCDCRLKGFVEFIRAVGPPIILMNSYLLCSGPTSKVDT
FFHKIQLKTCTKPVASAPETNINVPPGANVTLSCLVKARPGPSIEWMHSQKIIRGFTATV
TPIDEETVNSTLVIPSLYLANGGLYTCLANNFIGNSSAEITVNISTLSNSAPLLPPSPIL
SPDENTSIDIRIAKQTVYGITVEWRAAMENPAETWFTVHFGKYGSPKRETIYIGPGINSY
SVSDLLPVTKYEVCVTLKNHPPREGQCVVFVTGSDVSEMEQRERLIHIVVVVCVMVLSVP
VGMYACTTEARFSCAERCGNLWRKSYLWSRNRNRQEAEFQGVESQGPESQGIDSLGAFDS
LQAASDEVLCRDLQEKAKKKQKSDDRCKGGSAAYLY
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggatggcttttgcgtcgcgttcggcatttcttttttgttgtacatcatcactcccgga
tcgtcaacttgtctgaagggttgctcctgcgtagatgagaccctaggaaggtctttgctc
tgcatggaaacgtacatgggccaaattccagaggacatcccgcacaatttcacaaagatc
cggatggaaaactgccacctgacggagctacctccgggatccttctcgaaattgggtact
ttggaattcctgtggctcaatttcaatgacatcaccttgatgaacatcaaaagcctacag
gggctggccaacctgaccgagttgcggctgcagggcaacaagctgacttcggttccgtgg
actgcgtttcaggacacgccgcgactcaaaattctggacttgaaacacaatcgtctcgac
gtcctaccagaatattccttaaaacacttgcctgtgctgacctacttagatttatccttc
aaccagcttagtgttatatcaaaagatgtattcatgaattggcccctttaccagaaagca
gagcgagtttgggcaaaggagggctcggtttccaatgtggtcttagcgctacacgacaac
ccctggctgtgcgactgccgcctgaaaggcttcgtggagttcatccgagcggtcgggcct
cccatcattctcatgaactcttatttgttgtgttcgggccccacctctaaagtggacaca
tttttccacaagatccagttgaaaacctgcacaaagcccgtggcctctgccccggagact
aacatcaacgtgcctccaggagccaacgtaacgctctcgtgcttagtcaaggccaggccg
ggcccaagcattgagtggatgcacagtcagaagattataagaggatttactgctactgtg
actcccattgacgaggagactgtcaactctactttggtgatcccctcgctgtacctagcg
aacggaggcctctatacctgcctggccaacaatttcattggcaattcttctgctgaaatc
acggtgaacatcagcactttgagtaactccgctcctctcctgccaccttcacccatcctt
tccccggatgagaacacctccattgacatccgcatcgccaagcagacggtttatggcatc
accgtggaatggcgtgccgccatggagaacccggccgaaacctggttcaccgtccatttt
ggaaagtacggctcacccaaaagggagaccatctacatcggaccgggtatcaacagctac
tcggtcagcgatttgcttcccgttaccaaatacgaggtttgcgtgaccctgaagaaccac
ccgccaagggagggccagtgtgtcgtctttgtgacgggaagtgacgtaagcgagatggag
cagagggagcgtctgattcacatcgtagtcgtcgtttgcgtcatggtgctgtccgtgccg
gtcggcatgtacgcctgcaccaccgaggcccgctttagctgtgcggaacgctgcgggaat
ctgtggaggaagtcatatttgtggtctcgcaataggaaccgccaggaggctgagtttcag
ggggtggaaagtcaaggtcccgagagtcaggggatagacagtctgggcgcgttcgacagc
ctccaggcggccagtgatgaagtcctatgcagggacttgcaagaaaaagccaaaaagaag
cagaagtctgacgacagatgcaaaggaggaagtgcggcctatctgtattaa
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