KEGG   Syngnathus scovelli (Gulf pipefish): 125991219
Entry
125991219         CDS       T08785                                 
Symbol
polr3e
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03020  RNA polymerase
sscv04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125991219 (polr3e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    125991219 (polr3e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sscv03021]
    125991219 (polr3e)
Transcription machinery [BR:sscv03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     125991219 (polr3e)
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 125991219
NCBI-ProteinID: XP_049614908
LinkDB
Position
21:5830884..5837266
AA seq 690 aa
MASGDDDDPIIEEIDVYLAKSLAEKLYLLQYPVRPSTMTYDNVNILAAKIKTKQQRVELQ
MGMDTKSPNYCKSKGEQIALNVDGTGYEESNTYSVKLMDNQTFSSIQATTNTSRYAAGIF
RKGELHLTPLTGILQMRPSFAYLDKADNKTREREADNEGGDSSQEEGEEEAKAVSVRYSR
PESEQARQRRIQSYEFLQKKQAEEPWIHLQYHGVRDGRSEHERQYLFSQRVDASDNTELV
KTPKEYLTMLMPPPAEEKVVKPVGPSNVLSMAQLRTLPLGEQIKTLMKNVKVIQFASLMG
LLASGTDATAVLRCIQQVALLVQGNWVVKSDVLYPKNTCSPHSGVAADVLCRGRDFVMWR
FTLERSLMRKEVAAVIKLPPEDVKDFLEQVAVPRVNRGWEFLLPADTNFVKKHADVAQRQ
HMLWQGIQSKLEKVFHFSKDDFVPKNSPQSAPVHISGEQRLKLAKDRVQEKQASLQKDLD
AKRAGSSGADIPIKQEPPSDGEPEPMDTSPPPPSCSGIPNGSLNGYAGMECVNGGTLSNA
PSPRLLDFVTETFGKNPVLTLNELKRLFSLHLATVPAGHIPFGPVSDHMLQDAVLLSRCK
RIMVPFPALTTASADEQKVFGLWETGEEVDKHRRLLYEMFTKSYHLRRSAVQARLSEEFG
DVSKADVDRLLKECCSSHAGMWYLKGTIQS
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggccagcggggatgacgacgaccccattatagaggagattgacgtctatctcgccaaa
agccttgcagagaaactttatcttcttcagtaccccgtgcgaccatccactatgacctac
gacaatgtcaacattctggctgctaagatcaaaacgaaacagcaacgggtggaattgcag
atgggcatggacaccaagagccccaactactgcaaaagcaagggcgagcagattgcactg
aacgtggacggcactggctatgaggaaagcaacacatattcagtgaaactgatggacaat
cagaccttctcgtctatccaggccaccaccaacacttcccgatacgccgctggcatcttt
cgaaaaggtgagcttcacttgacgccgctgacagggatcctgcagatgaggcccagcttt
gcatacctggacaaggccgataacaaaacccgagagcgagaggcggacaacgagggtgga
gactcgtcccaggaagaaggcgaggaagaagccaaagccgtttcggtgaggtactctcgg
ccagagtcggagcaagcacggcagaggaggatccagtcgtatgagttcctccagaagaag
caggccgaagagccctggatccatttgcagtatcacggcgtcagggacgggcggtcggaa
catgaacgtcagtatttgttcagtcagcgtgtggacgcctctgacaacactgagctggtt
aaaacgcccaaggagtaccttactatgctgatgccgcctccagcagaggaaaaagtcgtg
aagcccgtcggcccgagcaacgttctctccatggcccagctgcgcacgctgccgctcggc
gagcagatcaagacgctgatgaagaacgtcaaggtgatccagttcgccagtctgatgggt
cttttggcgtcaggcactgatgctactgcagtgctgcgctgcatccagcaggtggcgctg
ctagtccagggcaactgggtggtgaagagtgacgtcctgtatcccaaaaacacgtgcagt
cctcacagcggcgtcgcagcggatgtgctgtgtcgagggcgagactttgtgatgtggcgg
tttacgctggagcgctccctgatgaggaaggaagtggcggctgtgatcaaacttcctccg
gaggacgtgaaggattttctggagcaggtggcggtgccgcgtgtcaaccgcggctgggag
ttcctacttcccgccgacaccaactttgtcaagaagcacgccgacgtggcccagcgacag
cacatgctgtggcagggcatccagagcaagttggaaaaggtcttccacttctcaaaggat
gactttgtgccaaagaattccccgcagtctgcgccagtccacatcagtggcgagcagcgg
ctcaagttggccaaggaccgtgtgcaggagaagcaggcttctctccaaaaagacctggac
gccaagcgagcaggaagcagcggcgccgacatccccatcaaacaggagcccccaagcgac
ggcgagcccgagcccatggacacgtcccctcctccgccgtcctgttcgggcatccctaac
ggctcgctcaatggctacgctggcatggagtgcgtaaacggcggcaccctcagtaacgcg
ccctcgccacgactgctggactttgtgacagagaccttcgggaagaatcccgtcttgacg
ctgaatgagctcaagaggctcttcagcctccacctggccaccgtgccggcggggcacatt
cctttcggacctgtgtcggaccacatgctgcaggacgccgtgctgctcagccgctgcaaa
cggatcatggtgcctttccccgctttgaccacagcttctgccgacgagcaaaaggtgttc
ggcttgtgggagaccggagaagaagttgacaagcaccggcgcctgctctacgagatgttc
accaaatcgtaccacttgagacggagcgcagtgcaagcccggctcagtgaagagtttggc
gacgtctccaaggctgacgtggaccggctgctcaaggaatgctgcagcagtcatgccggc
atgtggtacctgaagggaaccatccagtcctga

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