Syngnathus scovelli (Gulf pipefish): 125991261
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Entry
125991261 CDS
T08785
Symbol
rapgef2b
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04517
IgSF CAM signaling
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125991261 (rapgef2b)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125991261 (rapgef2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125991261 (rapgef2b)
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Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
PDZ_6
RA_2
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125991261
NCBI-ProteinID:
XP_049614990
LinkDB
All DBs
Position
1:complement(20784765..20810825)
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AA seq
1444 aa
AA seq
DB search
MKPLAAAAVDSNGVPSQQDKTPLPADFSRLHLADGLHPQVTHVSSSHSGCSITSDSGSSS
LSDIYQATENESGDMDLSGLPETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDR
TDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILN
GSVEVTYPEGRTEILCMGNSFGVSPTMEKEYMKGAMKTKVDDCQFVCIAQQDYCCILNQV
EKNMQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTPERLTMHLVEEHSVVDPTYIEDF
LLTYRTFLSSPMVVGKKLLEWFHDPSLRDKVTRVVLLWVNNHFNDFEGDAAMTHFLEEFE
NNLEREKMCGHLRLLNIACAAKAKPRLVTLTKASREADLAFSLLGGQDKGFRVFIDAVEA
GSKAAEAGLKRGDQILEVNGQNFENVQLSKANEILKNNTHLSITVKTNLLVFKELLTRPE
QELHRDVDGEDEHDRKNGAPHLPKIGDIKKASRYSIPDLAVDVEQVMGLEKASKKVKSNS
VGGRNKLKKIFDKTLTSILPPKPYNDVCVGQSQDDSIVGMKQSKQIPPALPVSGNLSSSN
PDLLQSHHRILDFNNQPDMSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAA
PEAYSLCEVSVTPEGVIKQRRLPDQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLL
REGQISLLQLSTVEVATQLSMRAFQLFCAIEPTEYIDDLFKLRPKAGGATSLKRFEEAIN
AETFWVATEVTREANQLKRMKTIKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRLRGT
WEKLPSKYEKLFGDLQDLFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGND
SKVDGLVNFEKLRMIAKEIRHVGRMASVNMDPNLMFRTRKKKWRSLGSLSQGSANAAVLD
VNQAGSHKKRVRRSSFLNAKKLYEDAQMARKVKQYLANLSLENNEESLQTLSLQCEPSVS
TLPKNSGVRRADTSPVVSRAASQQRGQLAKGSQALQVPAVALYPSRKKVPVKDLPPFGTS
SPQSLKKILSLSEEASERHRRHPDDATASNATSQLSSPPGSPQSSPKKGFNRMGDSYSDC
SQSEMSSRSSLLSNLSFEDERRLRHSGGVGESHVGGMRLERRAATDPDQYSLGSYSSMQD
CRGIYAGCPTVLSSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSW
ETLSFSGGLPPAGGPEALLWAAQTRGSWASAGSSSSSSAAYWGEDSEGDTGTIKRRGGKD
VNADAETSSITSTGSEEAKQTGRPSPSPVTAACKGLVSRKEGRYREPPPTPPGYTALTIS
DLADGQSPPPPGPNSTTSATPTSRRPPDYTTALQRSRMITQSPDXAGPSSGIQAEDQQPP
VRPG
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgttagcagcagcagcggtagacagcaatggagtgccgagccagcaggataaa
acgccgttacccgcagacttcagccgacttcatctggccgacggcttgcacccacaggtg
acgcacgtgtcctccagccactcaggatgtagtatcaccagcgactcgggaagcagcagc
ctgtctgatatctatcaggccaccgagaacgaatcgggtgacatggacctgagcggcctc
cctgagactgccgtcgactctgaggaggatgacgatgaagaagacattgagcgagcgtca
gaccctctcatgagccgggacattgtccgagactgcctggagaaggaccccatggacagg
acggatgacgacatagagcaattgctggagttcatgcatcagctgccggccttcgcgaac
atgaccatgtcagtgcggcgtgaactctgcgccgtcatggtgttcgccgtggttgagcgc
gccggtaccattgttctcaacgacggcgaggagctcgactcttggtccgtgattttgaac
ggctccgtggaggtgacataccccgaggggcgcacggagatcctgtgcatgggcaacagt
tttggggtgtcacccaccatggaaaaggagtacatgaagggggcgatgaagaccaaggtg
gacgactgccagtttgtttgcatagcccagcaagactactgctgcatcctgaaccaagtg
gagaagaacatgcagaaggtggaagaggaaggcgagatcgtcatggtcaaggagcacaga
gaactggaccgaaccggcaccaggaaaggacacatagtcatcaagggcactccggagcgt
ctgaccatgcacctggtggaggagcactcggtggttgatcccacctacattgaggacttc
ctgttgacgtacaggacattcctatccagccctatggtggtgggcaagaagctgctggag
tggttccatgaccccagtctcagggacaaggtgacacgggtggttttgctgtgggtgaat
aaccacttcaacgattttgagggtgacgccgcaatgactcacttcctggaggagtttgaa
aacaaccttgagagagaaaaaatgtgcggccacctgcggctgttgaacatcgcgtgcgct
gccaaagccaaacctcgcctggtgacgctgacgaaagcgtccagggaggccgaccttgcc
ttcagcctgctgggaggacaagacaaaggcttcagggtcttcattgacgccgtggaggcc
gggagcaaggcggcggaggccgggctcaaacgaggggatcagatcttggaggtgaatggg
cagaactttgagaatgtccaactcagcaaagccaatgagatactgaagaacaacacgcac
ttgtccataactgtgaaaaccaaccttttagtgtttaaagagctgctaaccagacccgag
caggagcttcaccgcgacgtggatggtgaggacgagcacgaccgaaagaacggcgcgccg
cacctgcccaagattggcgacataaaaaaagccagccgctactcaataccggacctggcg
gttgatgtggagcaagtgatgggcctggagaaggccagcaagaaggtcaagagcaactcg
gtgggcggacgcaataagctcaagaagatttttgacaagacactcaccagcatcctgcct
cccaaaccttacaacgacgtctgcgtgggccagtcgcaggacgacagcatcgtgggcatg
aagcagtccaagcagatcccgccggcgctccccgtcagcggcaacctgtcgtcgtccaac
cccgacctgctccagtcgcaccaccgcatcctggacttcaacaaccaacccgatatgtct
gaccaggtgctgcgggtgtttaaagcggaccagcagtcgcgttacatcatgattggcaag
gacaccacagccaaggaggtggtggcccaggccatccgcgagtttgcgctgacagccgcg
cccgaggcctattcgctgtgcgaggtatcggtcacacccgagggcgtcatcaagcagagg
cggctgcccgaccagctctcgaagctagccgacaggatacagctgagcggaaggtactac
ctaaagagcaacatggagacagagacactgtgctcggacgaggacgcccaggatctcctt
cgcgagggccagatctcgctgctgcagctgagcacggtggaggtggccacgcaactgtcc
atgcgcgccttccagctcttctgcgccatcgagcccaccgagtacatcgacgacctcttt
aagttgcgccccaaggcgggcggcgccaccagcctcaagcgcttcgaggaggccatcaac
gccgagaccttctgggtggccacagaggtcacgcgggaggccaatcagctcaagcgcatg
aagaccatcaagcacttcatcaagattgcgctgcactgccgtgaatgcaagaacttcaac
tccatgtttgccattatcagcggtttgaacttggctcccgtctctcgccttcgaggaacg
tgggagaagctgcccagcaagtacgagaagctctttggcgatctacaggacttgttcgat
ccctccaggaacatggctaagtaccgaaacgtcctcaacaaccagaacctgcagccgccc
atcatcccgctctttcctgtcatcaagaaggacctgaccttcctgcacgaaggtaacgac
tccaaagttgacggcctagtgaactttgagaagctgcgaatgatcgccaaagaaatccgc
cacgtgggccgcatggcctcggtcaacatggaccctaacctcatgttcaggacaaggaag
aagaagtggagaagtttaggctccttaagtcaaggcagcgctaacgcagcggtgctggac
gttaaccaggcgggcagccacaagaagcgcgtgcgacgcagttccttcctcaacgccaag
aaactgtatgaggatgcacagatggctcgcaaggtcaagcagtacctggccaacctcagt
ctggagaacaatgaggagagcctgcagacgctctcgctgcaatgcgaaccctctgtcagc
acactgcccaagaactcaggggtccgccgtgccgacacttcccccgtggtgtccagagcg
gccagccagcagagaggccaactggccaaaggctcccaggccctgcaggtgcccgccgtg
gccctgtacccatcgcgcaagaaggtgcctgtaaaggacctgcctccctttggcaccagc
tcccctcagtcgctgaagaaaatcctgtctctgtcagaagaggccagcgagcgccatcgc
agacatcccgacgatgccacagcgtccaacgccacctcgcagctctcctctccgcccggc
tccccacagagctcccccaagaagggtttcaaccgcatgggcgactcgtactctgactgc
agtcagagtgagatgtcgtctcgctccagccttctcagcaacttgtctttcgaggacgag
cggcggctgaggcattcggggggcgtcggcgagtcccatgtcggtggaatgcgcctagaa
cggcgagccgccaccgatcccgaccagtatagtctagggtcgtactcgtcgatgcaggac
tgtaggggcatctatgcgggctgccccacggtgttgtcgtcacccagctctgaggagctg
acccaggaccagggggaccgcgtgtccctggacgcggccgatagcgggcgcggctcctgg
acgtcttgttcgtccggttcccacgacaacatccagaccatgcagcaaggccgcagctgg
gaaacactgtccttcagtggggggctcccgcccgccggcggtccggaggccctactgtgg
gcggcgcagacacggggcagctgggcctcggccggctcctcttcatcatcgtctgccgcc
tactggggcgaagactcagaaggtgacacgggcaccatcaagaggcgaggcggtaaggac
gtcaacgcagacgccgagaccagcagcatcacgtccaccgggtcagaggaagccaagcag
acggggaggccctcgccctcacccgtcaccgctgcctgtaaaggactcgtatcccggaaa
gaggggcgatatcgcgagcctcccccaacgccaccgggctacacagcactgaccatttcc
gacctggcagatggccagtcgccgccccctcccggaccgaattccaccacatctgcgacg
ccgacaagccgccgtcctcccgactacaccacggcgctgcagcgctcgcgcatgatcacg
caatcccccgacntcgcaggcccatcaagcggcatccaagcagaggaccagcaacctccg
gtgcgtccgggatga
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