Syngnathus scovelli (Gulf pipefish): 125991282
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Entry
125991282 CDS
T08785
Symbol
top2a
Name
(RefSeq) DNA topoisomerase 2-alpha isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sscv03032
]
125991282 (top2a)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125991282 (top2a)
Enzymes [BR:
sscv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
125991282 (top2a)
DNA replication proteins [BR:
sscv03032
]
Eukaryotic type
DNA Topoisomerases
125991282 (top2a)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
125991282 (top2a)
Centrosome formation proteins
Centriole proteins
125991282 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
DTHCT
Motif
Other DBs
NCBI-GeneID:
125991282
NCBI-ProteinID:
XP_049615037
LinkDB
All DBs
Position
21:7341025..7351361
Genome browser
AA seq
1553 aa
AA seq
DB search
MNPIIDIIAVTVKNKMTKVTTEEEQTKLLANQPVEKAKKDSKNTSVERIYQKKTQLEHIL
LRPDSYIGSVEPVTQQMWVYDDDIGMNCRDVTFVPGLYKIFDEILVNAADNKQRDERMSC
IKINIDVENDTISIWNNGKGIPVVEHKVEKMFVPALIFGQLLTSSNYDDDEKKVTGGRNG
YGAKLCNIFSTKFTVETACRESKKTFRQTWYDNMSKAGDATIKSFDGDDFTCITFRPDLP
KFKMRVLDKDTVALMTRRAYDIAGSAKGVRVFFNSKRLPITDFRSYVNLYVKDKVNDVGK
ELTVVHEIVNGRWEVCLTVSEKGFQQVSFVNSIATTKGGRHTDYVADQVVSKLIDVVNKK
KDKGGVTVKPFQVKNHMWLFVNCLIENPTFDSQTKENMTLQHKSFGSTCVLSDKFIKQAT
NCGIVENIMNWVKFKAQLQLNKKCSAVKQTKIKGVPKLDDANDAGGRNSLGCTLILTEGD
SAKTLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINSLIKILGLQYKKNYS
DPESLKTLRYGKVMIMTDQDQDGSHIKGLLINFIHYNWPSLLRHNFLEEFITPIIKATHK
KTQLSFYSIPEFNEWKESQSNYKSWKIKYYKGLGTSTSQEAKEYFTDMQRHRIPFKYAGP
EDDEAITLAFSKKKVEERKDWLTNFMINRRQRKEQNLPEEYLYGKSTTSLTYGDFVNKEL
VLFSNADNERSIPCLADGLKPGQRKVLFCCFKRNDKREVKVAQLAGSVAEMSAYHHGETS
LMMTIVGLAQNYVGSNNLNLLQPLGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPVDD
NLLNNNYDDNQRVEPEWYIPIIPTVLVNGSDGIGTGWASKIPNFDVREIVANVRRMLNGE
DLLPMLPNYKGFKGTIDQLMENQYMVCGELAVLDSTTIEISELPVKTWTQTYKESVLEPM
LNGTEKNPPIITDYKEYHTDVTVRFVIKMTEERLLEMEAAGLHKVFKLQNPLTCKSMVLF
DHAGSLKKYDSVLEILKDFFKLRLSYYDLRKEWLAGMLGAESAKLTNQARFILEKIQGTL
VIENKPKKELIRMLQQMGYDSDPVKTWKQGSGKNEEQAEEDQEEAPEEDTSGPDYNYLLS
MPMWFLTKEKKEELCRQRDAKMTELNVLSNKTPASLWEDDLTAFLEELDRVEAKEKEDAE
MPVAKTSKGKAAKMKAKVVTLPTPQGRRIIPRITSAMKAEASKKADLKRSRKDKTEDVNT
KIDFGDGDQEDDPSPPLAKKMKTSSQGKGSKTGKQTTLQFKPVAKKAKKSLTSDEESESW
SEKEMEVEEVAAPREKIQRKTKVAKKYMSDSEDEFDDCVKSKSKKRIGAISDDDDSFAPN
LDGSNESDLDSPKAPEPPKKVTKAKSTAKKQLGSKSIAQSDKQEAAPKAPVQRKTKAAAP
KKAADVKQPSIMDALSKQKPSASKSIPSFDSSDSEPKVQKAKSAPKRKQIQSDSDSDVGD
LVSRLKAKSTAVAKKKASKWSDEENAGPVPPRNMLSRAKKPVCYGFDSDSESD
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctattatcgatattatcgcagttactgtaaaaaacaaaatgacaaaagtcaca
acagaagaagagcagacaaagctcttagcgaaccaaccagtggaaaaggccaagaaggat
tccaaaaacacatcagtagaaaggatctaccagaagaagacacagttggaacacatatta
ctccgacctgattcatacatcggctcagtcgagcccgtcacccagcaaatgtgggtttat
gatgacgacattggaatgaactgccgggatgtgacattcgtgccggggctttacaagata
tttgatgagattcttgtaaatgctgcggacaacaagcagagagatgagcgcatgtcctgc
atcaaaattaacattgacgtcgaaaacgacaccatcagcatctggaataacggcaaggga
atcccggtggtggagcacaaggtggagaaaatgtttgtgcctgcactcatcttcgggcag
ctcctcacctctagtaactatgacgacgatgaaaaaaaagtgacaggtggacgtaatgga
tacggtgccaagctgtgcaacatcttcagcacaaagttcacagttgagacggcctgtcga
gaatcgaagaagacatttcgacagacatggtacgacaacatgagcaaggccggggatgct
accatcaaatcgtttgacggagatgattttacttgcatcacctttcggcccgatctgccc
aagttcaagatgagggtcctggataaagacacggtggccctgatgaccaggagggcctac
gacatcgctggtagtgccaagggtgtccgtgtgttcttcaacagcaagaggctacctatc
acggatttccgcagttacgtgaatttatacgtgaaggacaaagtgaacgacgtgggcaaa
gagctgacggtggttcatgagatcgtgaacgggcgctgggaggtctgcctcactgtgagc
gagaagggattccagcaagtcagttttgtcaacagcattgccacgaccaagggcgggagg
cacaccgattacgtggccgatcaggtggtgagcaagctcattgatgttgtgaacaagaag
aaagacaaaggtggtgtgacggtcaaacctttccaggtgaaaaaccacatgtggctgttc
gtcaactgcctaattgagaatcccacgtttgactctcagaccaaagagaacatgactctg
cagcataagagctttggctccacttgcgtactcagcgacaagttcattaaacaggccacc
aactgcggaattgtggaaaatattatgaactgggtgaagttcaaagctcagctgcagctc
aacaagaagtgctcggcagtcaaacagaccaaaatcaaaggcgtgcccaagctggacgac
gccaacgacgcaggcggcaggaactctctcggctgcacgctcatcctcaccgagggagac
tcggccaagactctggccgtgtctgggctgggcgtgattggcagagaccgatatggcgtc
ttccctctgagaggaaaaattctcaacgtacgggaagcttcacacaagcagattatggag
aacgccgagatcaacagcctcatcaagatcctcggactgcagtacaaaaagaactacagt
gacccggagtccctcaagacgttgcgttatggcaaagtcatgatcatgacggatcaggat
caagacggctcccacattaaaggtttgttgatcaacttcatccactacaactggccttcg
ttgctgcgccacaactttttggaagagttcatcactcccatcatcaaagcaacacacaag
aaaacgcagctgtcattctacagtatcccggagttcaacgagtggaaggagagccagtcc
aactacaaatcttggaaaatcaaatactacaaaggtttgggaacgagcacatcgcaggag
gccaaggagtatttcactgacatgcagagacaccgtattccatttaaatacgcggggcct
gaagacgatgaagccatcacccttgcctttagcaagaaaaaagtggaggaacgcaaagac
tggctcaccaacttcatgatcaatagacgccagcggaaggagcagaacctgcctgaggag
tatctctacggcaagtctaccacgtctctcacctacggcgatttcgtcaacaaggagctg
gtactcttctccaacgctgacaacgagaggtccattccctgcctggcggacgggctgaag
ccaggccagaggaaggtgctgttttgctgcttcaaacgaaacgacaaacgggaagtgaag
gtggcccagttggctggttccgtggctgagatgtcagcgtatcatcacggcgagacttct
ctgatgatgaccatcgtcggattggctcagaactacgtggggagcaacaacttgaacttg
ttgcagcctcttggccaatttgggaccaggctgcacggcggcaaggactccgccagcccc
cgttacattttcaccatgctcagccctctggcccgccttcttttcccgccggtggacgac
aatctgctgaataacaactatgacgacaaccagcgcgtggagcccgagtggtacatccct
atcattcccaccgtgctggtcaacggctcggacgggatcggcacaggctgggccagcaaa
atccccaacttcgacgtccgggagattgtcgccaacgttcggcgcatgctcaacggagag
gacttgctacccatgctcccaaactacaaaggctttaaagggaccattgatcagctgatg
gaaaaccagtacatggtctgcggagagctggccgtccttgactccaccaccattgagatc
tcagagttgcctgtcaaaacctggacgcagacctacaaggagagtgttctggaacccatg
ttgaacggcacggagaagaatccccctattatcacagactacaaggaataccacaccgac
gtcactgtccgattcgtgatcaagatgaccgaagagaggctgctggagatggaggctgcg
ggcctccataaagtcttcaagctgcaaaatcctctcacctgcaagtccatggttctgttt
gaccacgcgggcagcctgaagaagtacgactccgtgctggaaatcctcaaggacttcttc
aagttgagattgtcgtactacgacctgagaaaggaatggctggcgggcatgctgggggca
gagagcgccaagctcaccaaccaggctcgtttcatcctggagaaaatccagggcaccttg
gtcattgagaacaaaccaaagaaggaactgattcgcatgctgcagcagatgggttacgac
tcggacccagtcaaaacttggaaacagggtagcggcaagaacgaggagcaagcagaggag
gatcaggaggaagctccagaggaggacaccagcggtcctgactacaattacctgctcagc
atgcccatgtggttcttgaccaaggagaagaaggaggagctgtgcaggcaaagagatgcc
aagatgacagagttgaacgtgctgagcaacaagactccggcgagcctctgggaggacgac
ctgactgcgtttttggaagaactcgatcgcgttgaagccaaggagaaggaggatgccgag
atgcccgtagcaaagacttccaaaggcaaagcggcgaagatgaaggccaaagtggtcacc
ctgcccacgccgcagggtcgccgcatcatcccgcgcatcaccagtgccatgaaagccgag
gcgagcaagaaggccgacctcaagagaagccgaaaagacaagaccgaagacgtgaacaca
aagatagattttggggatggtgaccaagaagatgacccgagtcctcccctggcaaagaaa
atgaaaacaagctcacagggcaaagggtcaaagacgggcaagcagaccacccttcagttc
aagccggttgccaagaaggccaagaagagtctgacatcggatgaggagagtgagagctgg
tctgaaaaggaaatggaggttgaggaggttgctgcaccaagagagaaaattcaacgcaag
accaaagtcgccaagaagtacatgtctgatagcgaagatgagtttgacgactgcgtgaag
agtaaatctaaaaaacggatcggtgccatcagcgatgacgacgatagctttgctccaaac
ctcgacggctcgaatgaaagcgacctggactccccaaaagccccagagccaccgaagaaa
gtgacaaaggctaaatcaacagccaagaaacaacttggaagcaaatcgatcgctcagtca
gacaagcaagaggctgcgccgaaggctccagttcagcgcaagaccaaagcggctgctcca
aagaaagctgcagatgttaagcagccgtccatcatggatgctctgtccaaacaaaaacct
tcagcgtccaagagtattccctcgttcgactctagcgactcagagcccaaagtgcagaaa
gccaagtcggcccccaaacgtaaacaaatccaaagtgactctgacagtgacgtcggggac
ctcgtatcccgccttaaggccaaatcaaccgcagtagcaaagaaaaaagcaagcaagtgg
agcgatgaggaaaatgctggtccggtgccacctcgcaacatgctcagcagagctaagaag
cccgtttgttacggctttgactccgattccgagtctgactaa
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integrated database retrieval system
