Syngnathus scovelli (Gulf pipefish): 125991304
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Entry
125991304 CDS
T08785
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04145
Phagosome
sscv04210
Apoptosis
sscv04530
Tight junction
sscv04540
Gap junction
sscv04814
Motor proteins
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125991304
09143 Cell growth and death
04210 Apoptosis
125991304
09144 Cellular community - eukaryotes
04530 Tight junction
125991304
04540 Gap junction
125991304
09142 Cell motility
04814 Motor proteins
125991304
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125991304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125991304
03036 Chromosome and associated proteins [BR:
sscv03036
]
125991304
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125991304
04147 Exosome [BR:
sscv04147
]
125991304
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125991304
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
125991304
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
125991304
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125991304
Exosomal proteins of other body fluids (saliva and urine)
125991304
Exosomal proteins of colorectal cancer cells
125991304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
125991304
NCBI-ProteinID:
XP_049615086
LinkDB
All DBs
Position
21:complement(7367723..7370591)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEIRSGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAISNIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSLADDEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggaatgtatttccatgcacgttggccaggcaggcgtccagatgggcaatgcctgc
tgggaactgtactgcctggagcacggcatccagcccgatggccagatgcccagcgacaaa
accattggaggcggggatgactcctttaacacctttttcagcgagaccggtgctggcaag
catgtccccagagcggtctttgtagatttggagccgaccgtcatcgatgaaatccgctct
gggacgtaccgccagctctttcatcctgagcagttgatcactgggaaggaggacgcggcc
aacaactacgctcgcggtcactacactgtcggaaaagagatcatcgacctggtccttgat
agaactcgcaaactggctgatcagtgcacaggcctacaagggtttctcatcttccactcc
ttcggcggcggaacgggctcaggcttcacctccctgctgatggagcgcctgtcggtggac
tacggcaagaagtccaagctggagtttgccgtgtaccccgccccccaggtgtcaacggcg
gtggtggagccctacaactccatcctgaccacccacactacactggagcactcagactgc
gccttcatggtggacaacgaggccatctacgacatctgccgccggaacctggacatcgag
cggcccacctacaccaacctcaaccggttgatcgggcagatcgtgtcatccatcaccgcc
tcgctgcgcttcgacggcgccctcaacgtggacctgaccgagttccagaccaacctggtg
ccctacccgcgcatccacttccccctggtcacctatgcgcccgtcatctctgccgagaag
gcctaccacgagcagctgacggtggccgacatcaccaacgcctgcttcgagccggccaac
cagatggtcaagtgcgacccccgccacggcaagtacatggcctgctgcctgctgtaccgg
ggtgacgtggtgcccaaggacgtcaactctgccatcagcaacatcaaaaccaagcgctcc
atccagtttgtggactggtgccccaccggcttcaaggttggcatcaactaccagcctccc
accgtggttcccggcggagacctggccaaggtgcagcgggccgtctgcatgctgagcaac
accaccgccatcgccgaggcctgggcccggctcgaccacaagttcgacctgatgtacgcc
aagcgcgccttcgtacactggtatgtgggcgagggcatggaggagggagagttctccgag
gccagggaagacatggccgccctggaaaaagattacgaggaggtgggcaccgacagcctg
gcggacgacgaggaaggcgaagagtattag
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