Syngnathus scovelli (Gulf pipefish): 125991366 Help Entry 125991366         CDS       T08785                                  Symbol vcla Name (RefSeq) vinculin a isoform X1   KO K05700   vinculin Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04510   Focal adhesion sscv04517   IgSF CAM signaling sscv04518   Integrin signaling sscv04519   Cadherin signaling sscv04520   Adherens junction sscv04810   Regulation of actin cytoskeleton sscv04820   Cytoskeleton in muscle cells sscv05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:sscv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     125991366 (vcla)    04518 Integrin signaling     125991366 (vcla)    04519 Cadherin signaling     125991366 (vcla)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125991366 (vcla)    04520 Adherens junction     125991366 (vcla)   09142 Cell motility    04820 Cytoskeleton in muscle cells     125991366 (vcla)    04810 Regulation of actin cytoskeleton     125991366 (vcla)  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     125991366 (vcla)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:sscv04812]     125991366 (vcla)    04147 Exosome [BR:sscv04147]     125991366 (vcla) Cytoskeleton proteins [BR:sscv04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      125991366 (vcla) Exosome [BR:sscv04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    125991366 (vcla) SSDB OrthologParalogGFIT Motif Pfam:  Vinculin Talin_IBS2B TruB_C_2 Mob_Pre LIM_bind Motif Other DBs NCBI-GeneID:  125991366 NCBI-ProteinID:  XP_049615178 LinkDB All DBs Position 21:complement(3756258..3765909) Genome browser AA seq 1087 aa AA seqDB search MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE TVQTTDDQIMKRDMPPAFIKVENACTKLVKAASMLKADPYSVPARDYLIDGSRGILSGTS DLLLTFDEAEVRKIIRVCNGILEYLKVSEVVESMADLITYTKNLGPGMTKMAKMIDERQQ ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTFEKMSGE IVEIIRVLQLTSWDEDAWANKDTEAMKRALGLIDSKMAQAKNWLRDPNAPAGDAGEQAVR QILDEAGKIGELCTGRERRDILATAKTLGQMTDQVSEMRVRGHGASPAAMQKAQQVSQGL DVLTGKVKNAARKLEDMTNSKQAIAKRMDAVQSWLADPNGAPEGEDNIKALLMEAKKIAD MCEDPKERDDILRSIGEIVGMTAKLSDLRRQGKGDTPEARTLAKQIATALQNLQSKTNKA VANSRPAKADVHLEGKIEQAQRWIDNPSVDDSGVGQAAIRGLVAEGRRLANALQGPYRQE LLGKCEQVEQLMAQLADLAARSEGDSPQARAIAHQLQEALKDLKGKMQAAMTQEVSDIFS DTTTPIKLLAVAATAPLDAPNRDEVFDERAANFENHANRLGATAEKAAAVGTANKSTVEG IQVAVRSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK SLLDASEEAIKKDLDKCRVAMDMQQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR EAVKAASDQLSQTISPMVMNAKAVAGNIQDPNLRKGFLDSGYKILDAIAKVREAFQPQEP DFPPPPPDLDQLNLNDEPAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQMAGDMVNEPMMV AARQLHDEARKWSSKVRSETRATRGQVPPFTTALKQGNDIIGAAKRMALLMAEMSRLVRG SSGNKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILS TVKATMLGRTNISEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWV RKTPWYQ NT seq 3264 nt NT seq  +upstreamnt  +downstreamnt atgccggtgtttcacacgaagacgatagaaagtatcctggagccggtggctcagcagatc tcccatctggtgatcatgcatgaggagggcgaggtggacggcaaggcgatcccagacttg acggcaccggtggcagccgtgcaggcggcggtgagcaacctcgtccgggtcgggaaggag accgtccaaaccaccgacgaccagatcatgaaaagggacatgccgccggcgtttatcaaa gtggagaacgcttgcaccaagctggttaaggcggcctccatgctgaaagccgacccgtac tcggttcccgctcgcgactacctcatcgacggctctcgggggatcctctccgggacctcg gacctactcctcacctttgacgaggccgaggtgcgcaaaatcatccgagtatgcaacggc atcttggagtacctgaaagtctcggaggtggtggagtccatggctgacctgatcacctac accaagaacctgggaccaggaatgaccaagatggccaagatgatcgacgagcggcaacag gagctgactcaccaggagcaccgcgtcatgctggttaactccatgaacacggtcaaggag ctgctgcccatcctcatctcaggtatcaaaatcttcgtgaccaccaagacgtcgggcagc caaggcgtggaggaggccctgaagaaccgcaacttcacctttgaaaagatgagcggcgag attgtggagatcatccgagtgctgcagctcacgtcctgggacgaggacgcctgggccaac aaggacacggaggccatgaaacgagctctggggctcatcgactccaagatggctcaggcc aagaactggctgcgagatcccaacgccccagcaggggacgcgggcgagcaggccgtccgc cagatcctggacgaagctgggaaaatcggcgagctgtgcacggggcgcgagcgcagagat atcctggcgactgccaagactctgggccagatgacggaccaggtgtcggagatgagggtc agaggtcacggcgcttctccggccgccatgcagaaggcccagcaggtgtcccaaggcttg gacgtcctgaccggcaaggtgaaaaacgccgctcgcaagctggaggacatgaccaactcc aagcaggccatcgccaagagaatggacgccgtccagagctggctggccgaccccaacggc gctccagagggggaagacaacatcaaggctctcctcatggaggctaagaagatcgccgac atgtgcgaggaccccaaagaacgggacgacatcctgcgttccatcggcgagatcgtcggc atgaccgccaaattgtcggatctccggagacaggggaaaggcgacacccccgaagccaga accttggccaaacagatcgccacggccctgcagaacctgcagtccaagaccaacaaagcc gtggccaacagcaggcccgccaaggctgacgtccacctggaaggaaagatcgagcaggct cagcgctggatcgacaaccccagcgtggacgacagcggcgtgggccaggcggccatccgc gggctggtggcggagggccgcaggctggccaacgccctgcagggcccctacagacaggag ctgctgggcaaatgcgagcaggtggagcagctcatggcccagttggccgacctggcggcc cgcagcgagggcgactccccgcaggcgcgcgccatcgcacaccagctccaggaagccctc aaagacctgaaagggaaaatgcaggcggctatgactcaggaagtttccgacatcttcagc gacaccaccacgcccatcaagttactggccgtggccgccaccgcacctctggatgcaccc aacagggatgaggtgttcgacgagcgggccgccaacttcgagaaccacgccaacaggctg ggcgccacggcggagaaggcggccgctgtgggcacggccaacaagagcacggtggagggc atccaggtggccgtcaggtctacccgagacttaacgccgcaggtggtttccgctgcccgg atcctgctgagaaaccccggcaaccaggctgcctacgaacatttcgagaccatgaagaat cagtggatcgataatgtcgagaagatgacgggtctcgtggacgaggccatcgacaccaag tccctgctggacgcctcggaggaggccatcaagaaggacctggacaagtgccgcgtggcc atggacatgcagcagccgcagatgctggtggccggcgccaccagcatcgcccgtcgggcc aaccgcatcctcctggtggccaagcgggaggtggagaactcggaggaccccaaattccgc gaggcggtcaaggcggcgtccgaccagctcagtcagaccatctcgcccatggtgatgaac gccaaagccgtggccgggaacatccaggatcccaatcttcgcaagggcttcctggactcg ggctacaagattctcgatgccatagcaaaggtcagggaggcgtttcaaccacaggagccc gacttcccgccgccgcctcctgatttggatcaactcaaccttaacgacgagccggctccg cccaaaccccctcttcccgaaggcgaggttcctccgcccaggccgccaccgccggaggag aaggacgaggagttccccgagcagatggccggcgacatggttaacgagcccatgatggtg gccgccaggcagctccacgacgaggcccgcaagtggtccagcaaggtacgctcagaaacg cgggccactcgaggtcaagtgccgccatttacgactgctcttaaacagggcaacgacatc atcggtgcggccaagcgcatggccctgctcatggcggagatgtcacgcctggtgcgcggc agcagcggcaacaagcgcgccctcatccagtgcgccaaggacattgccaaggcgtccgac gaagtcacgcggctcgccaaggaggtggccaagcagtgcacggacaagcgtatccgtacc aacctactccaggtgtgcgaacgcattcccaccatcagcacccaactcaagatcctgtcc accgtcaaggccaccatgttgggtcgcaccaatatcagcgaagaggagtcggaacaggcc accgagatgctggtccacaatgctcagaacctgatgcagtccgtcaaggagacggtgcgg gaggctgaggcagcgtccatcaaaatccgcaccgacgccggcttcaccctgcactgggtc cgcaagacgccttggtaccagtaa

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