Syngnathus scovelli (Gulf pipefish): 125991422
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Entry
125991422 CDS
T08785
Symbol
atrnl1b
Name
(RefSeq) LOW QUALITY PROTEIN: attractin-like protein 1
KO
K24332
attractin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sscv04091
]
125991422 (atrnl1b)
Lectins [BR:
sscv04091
]
C-Type lectins
Others
125991422 (atrnl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_5
Kelch_4
Kelch_3
Kelch_6
EGF_LMN_ATRN
Kelch_2
PSI
CUB
EGF_TEN
NANM
EGF_Teneurin
TMEM100
PSI_integrin
EGF_2
Motif
Other DBs
NCBI-GeneID:
125991422
NCBI-ProteinID:
XP_049615269
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All DBs
Position
21:complement(7854089..7875609)
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AA seq
1358 aa
AA seq
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MDVRLNYPMEDTCWGFGLVHLLVFAHSSPPKACDKPCLSGKCLNGSCMCEPGWVGDQCQH
CQGRFKLSEPSGFLTDGPINYKYKTKCTWLIEAYPNAVLRLRFNHFATECSWDHMYIYDG
DSVYAPLVAVFSGLIVPEVRGNETVPEVETTSGYALLHFFSDAAYNLTGFEIFYSINSCP
SNCSGHGKCTPGNSAASQVYCECDKYWKGEACDIPYCRNNCGSPDRGYCDLTGEKLCVCN
DSWQGPDCSLSVPSTESFWVLPSVKPFGTSLGRASHRAVVQDKVMWVVGGYTFNVTSFQM
ILNYNLESGVWNTVPVNNGPVARYSHSLASYQEDIFMFGGKLESGWANVTDELWVFNIPA
RAWQRKYPVAGSPAQVHMYAVEGHTAHCVVLESGEAVMLVIFGYSPLYSYISNVQEYNLR
TNTWTVPEPKGAIPQGGYGHTSTYYQASGSVFVHGGYKALPASKFGLVDDLYRYDVNTRT
WFILRESNSPRYLHSAVLLSGTLLVFGGNTHNDTSLSNGAKCFSADFLAYDIACDEWRTL
PKPNLHRDVNRFGHSAVVGNGSMFIFGGFSGVLLNDVLVYRPPSCRAFPTEEGCAQAGPG
VRCIWSKGRCLPWEASMSTGGISPAPFCPAKPATVDELCYRFSDCTSCTANTNGCQWCDD
KKCISAHTNCTLNVRNFTVCPVRNERVCSKLANCKSCSLNLNCQWDQSQSECHALPAQQC
SEGWSQVGEACLRINSSRESYDNAKHYCKNLQGNIASLTTAKQVDFVLDELKKLQRLDKR
LSPWVGLRKINVSYWGWEDMSPFTNTSLRWLPGEPSDSGFCAYLEEPQVSGLRANPCTAT
AHGLICEKATGNPNQSSRLPCKKPCSLHTTCSNCTSQAMECMWCSSAQRCVDSTAYVISF
PYGQCLEWQTGECLAQNCSGLRTCGQCLEQPECGWCADPSSTGKGLCTEGSYRGPMKRPA
KQGQSHDMSLEPAVCPKDKGYEWSFIHCPACQCNGHSTCTNGSVCEQCRNLTTGVHCQTC
MVGYHGDPTNGGKCQACKCNGHANMCQVLTGKCFCTTKGIKGDQCQLCDSENRYLGNPLR
GTCYYNLLIDYHFTFSLTQEDDNHYTAINFMASPEQANKNLEMFINASNNFNLNVTWSVG
STAGTISGEEVPIVSKNNIKEYGDSFSCEKFTFRTNPNITFYVYVSNFSWPVKIQISFSQ
HNSIMDLVQFFVTFFSCFLSLLLVAAVVWKIKQTCWASRRREQLMRERQQMASRPFASAA
VVLDARGGEQTEILPPMADGAPKPVAMEPCSGGKAAVLTVLMRLPSGPTRLPPPGQSGLI
VASALIDVSQQKPSDFKEKSLGLKNRKALAPTHQGTCV
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccggctcaactaccctatggaagatacttgctgggggtttgggttggtccac
ttgctcgtgttcgcccactcctcgccacctaaagcctgtgacaagccgtgcctgtccggg
aaatgtctcaacgggtcgtgcatgtgcgagccaggctgggtgggagaccaatgccagcat
tgccagggcaggtttaagttgagcgagccctcgggcttcctgacggacggtccgatcaac
tacaagtacaaaacaaagtgcacctggctgatcgaggcttacccgaacgccgtgcttcgc
ttacgcttcaatcactttgctacggaatgcagctgggaccacatgtacatttatgatgga
gactccgtatacgctcccctggttgccgttttcagcggcctcatcgtacccgaggtgcgg
gggaacgaaaccgttcccgaagtggagacgacgtcgggctatgcactgctgcacttcttc
agcgacgccgcctacaacttgactggatttgaaatattttactcgatcaactcgtgtccc
agcaactgctcgggtcacgggaaatgcacgccgggcaattcggcggccagccaagtgtac
tgcgagtgcgacaagtactggaagggggaagcctgcgacatcccgtactgccgcaacaac
tgcggcagccccgaccgcggctactgcgacctcaccggcgagaagctgtgcgtttgcaac
gacagctggcaaggtccggactgctcgctcagcgtgccgtccaccgagtcgttctgggtg
ttgcccagcgtcaagcccttcggcacctctctgggccgagcctcccacagggccgtggtg
caggacaaggtcatgtgggtggtgggaggctacacctttaacgtcacctccttccagatg
atcctcaactacaacctggagagcggcgtttggaacacggtgccggtcaataacggcccc
gtggccagatacagccactcgctcgcatcctaccaggaggacatcttcatgttcggcggg
aaactggagtccggctgggccaacgtgacggacgagctgtgggtgttcaacatccccgcc
cgagcgtggcagcgcaaatatcccgtggcgggctcgcccgctcaggtgcacatgtacgcg
gtggaaggtcacacggcgcactgcgtcgtcctggaaagcggcgaggcggtcatgctagtc
atcttcggctactcgcccctctacagctacatcagcaacgtccaagagtataatctgaga
accaacacttggacggtgccggaaccgaaaggtgccattccgcagggcggttacggccac
accagcacgtattatcaagccagcggcagcgttttcgtccacggaggttacaaggcgctg
ccggccagcaagtttggcctggtggacgacctctaccgctacgacgtcaacacgcgcacc
tggttcatcctgcgagaaagcaactccccccgctacctccactcggccgtgctcctcagc
ggcaccctgctggtcttcggcggcaacacgcataatgatacgtcgctaagcaacggcgcc
aagtgcttctcggctgacttcctggcgtatgacatcgcgtgcgacgagtggaggaccctg
cccaagcccaacctgcacagggatgtaaaccgcttcggacactccgccgtggtcggcaac
gggtccatgttcatcttcggcggcttctccggcgtcctgctcaacgacgtgctggtgtat
cggccgcccagttgccgagctttccccacagaggagggctgcgctcaggccggcccgggg
gtacgctgcatctggagcaaaggccgctgcctgccctgggaagccagcatgagcacgggc
ggcatcagccccgcccctttttgtcctgcaaaaccagctaccgtggacgagctctgctac
cgcttctcggactgcaccagctgcacggcaaacaccaacggatgccagtggtgcgacgac
aaaaagtgcatctcagcgcacaccaactgtactcttaacgtgcggaacttcaccgtctgc
cccgttcgcaacgagcgggtgtgcagcaagctggccaactgcaagagctgctcgctcaac
ctcaactgtcagtgggaccagagccagtccgagtgccacgcccttcccgcacaacaatgc
agcgagggttggagtcaagtgggcgaggcctgcctgcggatcaactccagccgcgagagc
tacgacaacgccaagcactactgcaagaatctccagggcaacatcgcctcgctcaccacc
gccaagcaggtggactttgttctggacgagctgaagaagcttcagcggctggacaagcgc
ttgtcgccttgggtgggcctgaggaagatcaacgtgtcgtactggggctgggaggacatg
tcgcctttcaccaacaccagcctgcgctggctgcctggcgagcccagcgactctggtttc
tgcgcctacctggaggaaccgcaagtgtcgggcctcagggccaacccgtgcaccgccacg
gcgcacggcctcatttgcgaaaaagccacgggaaaccccaatcagagctcccgcctgccc
tgcaagaagccatgctctctgcacaccacctgctccaactgcaccagccaggccatggag
tgcatgtggtgcagtagcgcccagcgctgcgtggactccaccgcttacgtcatctccttc
ccttacggccaatgtctggagtggcagacgggagagtgcctggcccagaactgctcgggt
ctgcggacgtgcggccagtgcctggagcagcccgagtgcggctggtgcgccgaccccagc
agcacggggaaggggctctgcaccgagggctcgtaccggggtcccatgaagaggccggcc
aagcagggccagtcccacgacatgagcctggagcccgccgtctgccccaaagacaaaggc
tacgagtggtccttcattcactgccccgcgtgtcagtgcaacggccacagcacgtgcacc
aacggcagcgtgtgcgagcagtgccgcaacctgaccaccggcgtccactgtcagacctgc
atggtcggttaccacggcgaccctaccaacggcggcaaatgccaagcctgcaagtgcaac
ggccatgccaatatgtgccaggtgctaactggcaagtgcttctgcaccaccaagggcatc
aaaggggaccagtgccagctgtgtgactcagaaaaccgttaccttggcaatccactcaga
ggaacctgttactacaatctactcatcgactaccacttcaccttcagtctcacccaagaa
gacgataaccactacacggccatcaacttcatggcctcccccgagcaggccaacaagaac
ttggaaatgttcattaatgcctccaacaacttcaacctcaacgtcacctggtccgtggga
tcgacagccggcaccatctcgggcgaggaggtgcccatcgtgtccaagaacaacatcaag
gaatacggcgacagcttctcctgtgaaaagtttaccttcaggaccaaccccaacatcacc
ttttatgtctacgtcagtaacttttcgtggcccgtcaagattcagatttccttttcccaa
cacaacagcatcatggacctggtgcagttctttgtgacctttttcagctgtttcctgtcg
cttctgctggtggcagccgtggtgtggaaaatcaagcagacctgctgggcgtcgcggcgc
cgagaacaactcatgagggagcgtcaacaaatggccagtcgtccttttgcttcggctgcc
gtcgtgctggacgccagaggaggcgagcagacggagatactgccgcccatggctgacggt
gcgccaaaacccgtcgccatggagccgtgctccggaggcaaagctgccgtgttgaccgtc
ctgatgcggctgccgtcggggccgacccgcttgcctccgccgggccagtcaggcctgatc
gtcgccagcgcactgatcgacgtttcccagcagaagccgtcagatttcaaggagaagtcc
ctgggcctgaaaaaccgcaaggccctggcgccgacacaccagggcacctgcgtctga
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