Syngnathus scovelli (Gulf pipefish): 125991431
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Entry
125991431 CDS
T08785
Symbol
fbxo11b
Name
(RefSeq) F-box only protein 11 isoform X1
KO
K10297
F-box protein 11
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125991431 (fbxo11b)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125991431 (fbxo11b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
125991431
NCBI-ProteinID:
XP_049615294
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All DBs
Position
21:8351006..8357331
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AA seq
891 aa
AA seq
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MNSVRATNRRPRRVSRPRPVQPERNNGDRDEEAPAAAAAEMAIEESGPGAQNSPYQLRRK
TLLPKRSAAASAAASSCPSKGLMEGASTSSTEAFGHRAKRARVSGKSHDLPAAPAEQYLQ
QKLPDEVVLKIFSYLLEQDLCRAACVCKRFSQLANDPILWKRLYMEVFEYTRPMMHPESG
RFYQVSPEEHEHPNPWKESFQQLYKGAHVKPGFAEHFYSNPGRYKGRENMLYYDTIEDAL
GGVQEAHFEGLIFVHSGIYTDEWIYIESPITMIGAAPGKVADKVVIENTRDSTFVFMEGS
EDAYVGYMTIKFNPDDKSAQHHNAHHCLEITVNCSPNIDHCIIRSTCTVGSAVCVSGQGA
CPTIKHCNISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRD
VGVFTFDHGMGYFENCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFI
ENKIYANNFAGVWITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIESNDIYGNALAGIQI
RTNSCPIVRHNKIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRKNRIH
SGKQVGVYFYDNGHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGL
GFIEDNEIFDNAMAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQA
GVLISTNSHPILRKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKD
NKINNNQDAIEKAVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGH
DVEFIRHDRFFCDCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagccaccaaccggagacccaggcgagtgtcgaggccgcgcccggtg
cagcccgagcggaacaacggggacagagatgaggaggctcctgcagcagccgcagcagag
atggctattgaggagtctggtccgggagctcagaatagtccctaccaactcagacgcaag
acgctgctccccaagaggagcgccgcagcctccgccgctgcctcctcctgccccagcaag
ggcctgatggagggagcatccacgtcctccacagaggccttcggccatcgggccaagcgg
gcacgcgtgtcgggtaagagccacgacttgccagcagcgccagcagaacaatatctgcag
cagaagctccctgacgaggtggtcctaaagattttctcctatttgctggagcaagaccta
tgccgggcggcgtgcgtctgcaagcgcttcagccagctcgccaacgaccccatactctgg
aagcgtctttacatggaggtgtttgagtacacccgtcccatgatgcaccctgagtcaggg
cgcttctaccaggtcagccccgaggagcacgaacaccccaacccctggaaggagagcttc
caacaattgtacaaaggtgcccacgtcaagccgggcttcgccgagcacttctacagcaac
ccgggcaggtacaagggcagggagaacatgctgtactacgacaccatcgaagatgcgctg
ggcggggtgcaggaagcccactttgagggcctcatttttgtccactcgggcatctacacg
gacgagtggatctacatcgagtctcccattactatgattggcgcagcgcccggtaaagtg
gcagacaaggtggtgatagagaacaccagagattcgacgtttgtctttatggagggctcg
gaggacgcgtacgtcggctacatgaccataaagttcaaccccgacgacaagtcggcgcag
caccacaacgcgcatcactgtctggagatcacagtcaactgcagtcccaacatcgaccac
tgcatcatccgctccacgtgcacagtgggttcggccgtgtgcgtgagcggccagggagcg
tgcccgaccatcaagcactgtaacatcagcgactgcgaaaacgtgggcctgtacatcacg
gatcacgcgcagggcatttatgaagacaacgagattagcaacaacgcactggcgggcatt
tgggtgaagaaccacggcaaccccatcatcagacgcaaccacatccaccacgggagagac
gtgggcgtcttcacgttcgatcacggcatgggctacttcgagaactgcaacattcaccgg
aaccgcatcgccggcttcgaggtgaaggcgtacgccaaccccacggtggtgcgctgcgag
atccaccacggccagacgggcggaatctacgtgcacgagaaggggcggggacagtttatc
gagaacaagatctacgctaacaactttgccggcgtgtggatcacatccaacagtgacccc
acgatacgaggcaacgccatctttaatggcaaccagggaggcgtgtacatatttggcgat
gggcggggtttgatagagagcaacgacatctacggcaacgccctggcgggaatccaaatc
cgcaccaatagctgccccatcgtgcgccacaacaagatccacgacggccagcacggcggc
atctacgtgcacgaaaagggccaaggggtgatcgaggagaacgaggtgtacagcaacacg
ctggccggcgtctgggtgaccacggggagcacccccgtcttgcgcaagaaccgcatccac
agcggcaaacaggtgggcgtgtatttctatgacaacggccacggcgtgctagaggacaac
gacatctacaatcacatgtactccggtgtacaaataaggacgggcagcaacccaaagatc
cggcgcaacaagatctggggcggacaaaatggcggcattttagtctacaactcaggtctg
ggcttcatcgaggacaacgagatcttcgacaacgccatggcgggcgtgtggatcaagacg
gacagcaaccccacgctgaggcgcaacaagatacacgacggcagagacggcggcatttgc
atcttcaacggagggagaggtctgctggaggagaacgacatcttccgcaacgctcaggcg
ggcgttctgatcagcacaaacagtcaccccatcctacgcaagaaccgcatcttcgacggc
ttcgccgcaggtatcgagatcaccaaccacgccaccgccaccctagagggcaaccagatc
ttcaacaatcgattcgggggtctttttctggcgtcgggcgtcaacgtcaccatgaaagac
aataagatcaacaacaaccaggacgccatcgagaaagcggtgagccgaggacagtgcctg
tacaagatctccagctacaccagctaccccatgcacgacttctacaggtgtcacacttgc
aacacgacagacaggaacgccatctgcgtcaactgcatcaagaaatgccaccaaggacac
gacgtggagtttatacggcacgataggtttttctgcgattgcggcgcgggcacattgtcc
aacccgtgcacgctggcgggcgagcccacgcacgacacggacactctgtacgattccgcc
ccgcctatcgagtccaacacgctgcagcataattga
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