Syngnathus scovelli (Gulf pipefish): 125991433
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Entry
125991433 CDS
T08785
Symbol
zranb1a
Name
(RefSeq) ubiquitin thioesterase ZRANB1
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125991433 (zranb1a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125991433 (zranb1a)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125991433 (zranb1a)
Peptidases and inhibitors [BR:
sscv01002
]
Cysteine peptidases
Family C64
125991433 (zranb1a)
Ubiquitin system [BR:
sscv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
125991433 (zranb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
125991433
NCBI-ProteinID:
XP_049615303
LinkDB
All DBs
Position
21:complement(8299814..8305744)
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AA seq
715 aa
AA seq
DB search
MTDPREKWACDYCTYENWPSATKCTMCRAHRSRGPIITEEPYKSGTDLDPARGSWDLPAN
EGGSGSLLICPDSSARPRVRPASMAEIATKWSCQMCTYLNWPRAVRCTQCMCQRPKSGSP
TESPHTSGCRPAPPHSPVDPCEEYNDRNRLNTHQQYWMCPSCTYQNSPITLVCVVCDHPR
AIELAAPSAERSPIINEQDRSRWRGSLGGCSTGVGPLAQRRSPPLAKREDNVQRDFQRIE
LAAGAVSGKEEQEVDFKKLKQIRNRMRKTDWLFLSACAGVVEGDLATVEAYKSSGGDIAR
QLTADEVHLLNRASAFDVGFTLVHLAIRFQRQDMLAVLLTEVNQQAAKCIPSMVCPELTE
QIRREITASLHQRKGDFACYFLSDLVTFTLPADIEDLPPAVQEKLFDEVLDRDVQKELEE
ESPVINWSMELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKTLHDSLHDC
SHWFYTRWKEWESWYSQSFGLHFSVQEEQWQEDWAFILSLASQPGASLEQTHIFVLAHIL
RRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAME
NDGYGDNRGAGANLNTDDDVTVTFLPLVDSERKLLHIHFLSAQEMGNEEQQEKLLRSWLD
CSVTDGGMLAAMQKSSRRRNHPLVTQMLEKWLDTYRQIRPCAALSDGEEEDDEDE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacggacccgagggagaaatgggcctgtgactactgcacctacgagaactggccctca
gccaccaagtgcaccatgtgccgcgctcacaggtcccggggtcccatcatcacggaggag
ccgtacaaaagcgggactgacttggacccggcacgaggctcctgggacctccccgccaac
gagggcggcagcggcagcctcctcatctgcccagactccagcgccaggccccgcgtccgt
ccggccagcatggccgagatcgccacgaagtggtcctgccagatgtgcacctacctgaac
tggccccgagccgtccgctgcacacagtgtatgtgccagcgtcccaaaagcggcagccct
accgagtcgccccacacctccggctgccgcccggcgccgccccactctcccgtggacccg
tgcgaggagtacaatgaccgcaaccgcctcaacacccaccagcagtactggatgtgcccg
tcgtgcacttatcagaactcgcccataacactcgtgtgcgtggtgtgcgaccacccgcgg
gctatcgaactggccgccccgtccgccgagcgctcgcccattatcaacgaacaggaccgg
tcgcggtggagggggagcttgggcggctgcagcaccggcgtgggtcctctggctcagagg
aggtcgcctcccttggccaagagggaggacaacgtccaaagggacttccagaggatcgag
ctggcggcgggagccgtgagcggcaaggaggagcaggaggtggactttaagaagcttaag
cagatacgaaaccggatgcggaaaacggactggctctttctcagcgcctgcgctggcgtc
gtggaaggagacctggcgacggtggaggcgtacaagtcgtcaggcggcgacatcgcgcgg
cagctgaccgccgacgaggtgcatctcctcaaccgggcgtctgcgttcgacgtgggcttc
acgctggtgcacctggccattcgctttcagcggcaggatatgctcgccgtgctcctcaca
gaggtcaatcagcaagcggccaagtgcatcccgtccatggtgtgtcccgagctgacggag
cagatccgcagggagatcaccgcgtcgctgcatcagcgcaaaggcgactttgcctgctac
ttcctgagcgacctggtcaccttcacgctccctgccgatatcgaggacctgcctccggcc
gtccaggagaaactatttgatgaggttttagatcgggacgtgcagaaagaactggaggaa
gaatcgccagtcattaactggtcgatggagctgggcacgcgtctggacagccgcctctac
gcgttgtggaaccgcacggccggggactgcctcctggattcggttctccaggccacgtgg
ggcatctacgacaaggactcggtcctgcgcaagacgctccacgacagcctgcacgactgc
tcgcactggttttacactcgctggaaggagtgggaatcgtggtactcgcaaagcttcggt
cttcacttctccgtgcaggaggagcagtggcaggaggactgggccttcatcttgtccttg
gccagccagcccggggcaagcctggagcagacccacattttcgtgctggcacacatcctc
cgcaggcccatcatcgtttacggcgtgaagtactacaaaagtttccgaggggagacgtta
ggatacacgcgatttcaaggcgtgtacctgccgctgctgtgggagcagagcttctgctgg
aagagccccatcgccctgggctacacgcgtggccacttttcggccctggtggccatggag
aacgacggttacggagacaatcgcggcgcgggcgccaacctcaacacggacgacgacgtc
accgtcacctttctgcctctggtggacagcgagcgcaagctgctgcacatccacttcctg
tctgcgcaggagatgggcaacgaggagcagcaggagaagcttctgcgctcgtggctggac
tgcagcgtgaccgacggcggcatgctggccgccatgcagaagagctcgcggcgccgcaac
cacccgctggtcacgcagatgctggagaagtggctggacacgtaccgacagatacgaccc
tgcgccgccctctccgacggcgaggaggaggacgacgaagacgagtga
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