Syngnathus scovelli (Gulf pipefish): 125991453
Help
Entry
125991453 CDS
T08785
Symbol
ppargc1b
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125991453 (ppargc1b)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
125991453 (ppargc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CobT
Nop14
Astro_capsid_p
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
125991453
NCBI-ProteinID:
XP_049615329
LinkDB
All DBs
Position
1:15627124..15682077
Genome browser
AA seq
869 aa
AA seq
DB search
MADCASLLDEELSSFVFNYLTENPDSQYGEEEVCSDRLDTDFADIDLSQLDTSDFDSVNC
LSELQWCSDQAADASPASIRYSTPDELFEIEEENAALLAALTDSLDGMVDAEVGGLSVFP
ALGEDEPEQDEDDHDHLHHLSVGAKHIKCSQDTEDPSLLKILLLTPPNVPVGKDSVHGHR
YRNRGLNSRTVRPPVKMDASQVRKPRAVRPAGRLCTELHRHLTISRRDAKEPPTADPEDE
EEEEEDEDDEDSESEEDDDEEEESSGSEVEARQIKAPAEPVKPQFTSEKELHSVVDLITY
MHTYCMPVRKQQGLDRKDPPRPRARPDAARPSVTNSPSRLVLVAPSASSGPGCEPRRLPF
ARRRQLKTNSLLRDLLQQSSSFDVSKPYGLHCPPYTQAGPGSPPSNRPPGTVTTKPDLCK
DPSLPARRNHPCEALQSPVEDSGSFSVRRSRRLASFPSRFAKRLRPGQTREGDWREERDN
GQAGGKLSPTQAGGGTTTEAGMQGDTTEMTKTCCHNEKRACLCLPLNTSKSTGEFSSKTF
EQTLGVDLCGTAGLTPPTTPPHKPVEDDLFKPTEARKDGERNSDASVHSSVHSSASVVGG
LRASWLSRTHQRKLPEQTELYAQLRRMGQAGDDDACRGFGDHDYCVLSLGESRKRSVAML
STVPQGVGEHQLSDAAPENGTQSNVGEPMTSSQPPSDCQSVATTPPASEEECSAVSRSPS
PTLHLCPDSTANKGNSSEHSEICPDDEQRNKANSDEENCQVFYIHNLPSSMTQNMLRKRF
QVFGTAEDCKVIICNEERCGVIKIRQSGTQRHRRERENVFQSATMSGRRLTRKRYIDLDE
AGPGPVKSKYDALDFDTLLKEAQKSVHHR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgcttcactattagatgaggaactctcgtccttcgtcttcaattacctg
acagagaatcccgacagccagtatggggaggaggaggtgtgctcagaccgcctggacacc
gactttgccgacattgacctctcgcagctggacaccagcgactttgacagtgtcaactgc
ctcagcgaactgcagtggtgcagtgatcaggcagcggatgcgtcgccagcctccatccga
tacagcacacccgacgagctttttgagattgaagaggaaaacgcggcgctgctggccgct
ctgacagacagcctcgacggcatggtagacgcagaggtgggcggcctctctgtcttcccc
gctctgggggaggacgagcccgaacaggacgaagatgaccacgaccatcttcatcatctt
tctgttggcgcaaaacacatcaaatgctcgcaggacacagaggacccttctctgctgaag
atcttgctgctcactccgcccaatgtgcctgtgggcaaagatagcgtccatgggcatcgc
tatagaaacagaggattaaactcacggacggtccggcctccagttaagatggatgcttct
caggtgcggaagccacgcgctgtgcgtccggcgggccgcctgtgcaccgagctccatcgc
catctcaccatatcccggcgggacgccaaggagcccccaactgcagatccggaggatgaa
gaggaagaggaggaggatgaagacgatgaggacagtgaatcagaggaggatgatgatgag
gaagaagagtcttctggtagtgaggtagaggcaaggcaaatcaaggcccctgccgagcct
gtcaagcctcaattcacctcggaaaaagaactccactctgtagtggatcttatcacctac
atgcacacatactgcatgcctgtgcgcaagcagcagggtctggaccgtaaggacccgccc
aggcctcgagctcgacccgatgccgcccgcccgtcagtaacaaactctcccagccggctg
gtcctggtggctccctcggcgagcagtgggccagggtgtgagccccggagacttcccttc
gcgaggcggaggcagttgaaaaccaactcccttctccgtgatctcctgcagcagagtagc
tcctttgatgtgagcaagccttatggattgcactgtccaccgtacactcaagcaggacca
ggatccccgccttccaaccgaccacctggcactgtcaccactaaaccagatctttgtaag
gacccttccttgcccgcaaggagaaaccacccctgtgaggcgctgcaaagccctgtggaa
gacagtggctcgttctcagttcgccgctccaggcgtctggcttcctttcccagccgcttt
gccaagaggctgcggcccgggcagacgagggagggtgactggagggaggaacgggataac
gggcaggcgggaggcaagctctcgccaactcaagcgggaggagggacaacgacagaggca
ggaatgcaaggtgatacaacagagatgaccaaaacctgctgccacaacgagaagcgagcc
tgcctgtgtctgcctctcaacaccagcaagtccacaggagagttcagcagcaagactttt
gagcagacgctcggcgtggatctgtgtggaactgcaggtctgacgcctcccactacaccg
cctcacaagccggtggaggacgacctcttcaagccaaccgaggccagaaaggatggcgaa
agaaacagtgacgcgtctgtccactcatctgtccactcctccgccagcgttgtcggtggc
ctccgagcatcctggctgagccgcacacatcagcgtaagctaccggagcagacagagctg
tatgcccagctgcggcgcatgggtcaggccggagacgacgacgcctgccgtggctttggc
gaccatgactattgtgtgctgagcctcggagaatcccgcaagcgcagcgttgccatgctg
agcaccgtaccgcagggggttggagaacaccaactcagcgatgcagcgccggaaaatggc
acccaatccaatgtcggcgagccaatgacatcatcacaacccccgtctgactgccagtca
gtggccaccacaccccctgcctcagaggaagagtgctctgccgtgtcccgctcgccctca
ccgaccctccacctttgtcctgactccaccgccaacaagggaaactccagtgaacactct
gagatatgcccagacgacgagcagaggaacaaagccaattctgacgaggagaactgtcag
gtgttctacatccacaacctgcccagcagcatgacccagaacatgttgaggaagcgcttc
caggtctttggcacagccgaggactgcaaagtcatcatctgtaatgaggagcgctgcggc
gtcataaagattcgccagtctggcacccagaggcaccggcgggagcgtgagaatgttttc
cagagcgcaactatgagtgggaggagactgacgaggaagcgttacatcgaccttgacgag
gcaggtccaggtccagtcaagagcaagtatgacgcgctagactttgatacgttgctgaag
gaggcccagaagtcggtgcaccaccgctga
DBGET
integrated database retrieval system
