Syngnathus scovelli (Gulf pipefish): 125991469
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Entry
125991469 CDS
T08785
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125991469 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125991469 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125991469 (ldb3b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
125991469
NCBI-ProteinID:
XP_049615356
LinkDB
All DBs
Position
21:complement(6946609..6951154)
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AA seq
290 aa
AA seq
DB search
MSTYTVTLNGPAPWGFRLQGGKDFNMPLTISRITPGSKASGGSLAQGDIISAIDGISTDG
LTHLEAQNKIKLATSRLVLSMQKSRRPAPVPIATPRMDSPMPIIPHQKVIANTPANVEYT
PSFNPIALKDSALSTHKPIEVRGPGGKATIVHAQYNTPISMYSQDAIMDAIAGQSQAKGH
EGEEAGSSLAGVLPMKDPVVDCASPVYQAVIRPTDNSLDLSEWARRAANLQSKSFKMLAH
ITGTEYMQDPDEEALQKSREKFESEMRGPRFAKLRKWHHGLSAQILNVQN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtacacggtgacgctgaacggcccggcgccgtggggcttccggctgcagggc
gggaaggacttcaacatgcccctcaccatctccaggataacgcccggcagcaaggcgtcg
ggtggcagcttggcgcagggtgacatcatctcggccatcgacggcatcagcactgatggc
ctgacgcacttggaggcccagaacaagatcaagttggccaccagcagactcgtgctcagc
atgcagaagtcgagacgtcctgcacccgtccccatagccacccccagaatggactccccc
atgcctatcatcccccaccagaaggtcatcgccaacacacctgcaaacgtggagtacact
cccagcttcaacccgatcgccctgaaagactcggccctgtccacccacaagcccatcgaa
gtgcgcggccccggcggcaaggccaccatcgtgcacgcgcagtacaacacgcccatcagc
atgtactcacaggatgccatcatggatgccatcgccgggcagtcgcaggctaaaggtcac
gaaggtgaggaggcgggatcttccctggccggggtgctgcccatgaaggacccagtggtg
gactgcgcctcgcccgtgtatcaggcggtcatcaggcccactgacaactcactggacttg
tccgagtgggctcgccgcgccgccaacctgcagtccaaaagcttcaagatgctggcgcac
atcaccggaaccgaatacatgcaagatccagatgaggaagctctgcagaagtcgagagag
aagtttgagtcggagatgcgaggtcctcgtttcgccaagctgaggaaatggcaccatgga
ttgtctgcacaaatcctcaacgtacagaactga
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