KEGG   Syngnathus scovelli (Gulf pipefish): 125991488
Entry
125991488         CDS       T08785                                 
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90 isoform X1
  KO
K24759  WD repeat-containing protein 90
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sscv03037]
    125991488 (wdr90)
Cilium and associated proteins [BR:sscv03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   125991488 (wdr90)
SSDB
Motif
Pfam: WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I WD40_MABP1-WDR62_1st CFA20_dom Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 Beta-prop_WDR19_2nd SGL Beta-prop_SPT8 Beta-prop_Nup120_160 WDR54
Other DBs
NCBI-GeneID: 125991488
NCBI-ProteinID: XP_049615379
LinkDB
Position
21:3020752..3035311
AA seq 1784 aa
MAAKDDWQHPFVNIFKHFRLLEWQKASKEGDVTLYKDKTLNSTAIRIRGAVPDNSCIRIP
KNTHQSLGLTGRYFYVLFKPNPAKPFLIVLDVTAEHDTKDGRVIRISISNMFKEFKFTST
SLLFPFQCGSEFDWITETAKFPQQRYRPPEAPKVLWTCLTMDLQRTLATYLNHLSYCHLK
SVKLCAYMSVKNAFTSDLLLNPEVSYRDAKLMGLPPSDGAGPMPREMMFPVPKGSTWQNC
YNHIRFPLEGDLNCGIIRKGPSKMETPSLMEDERQSQNPELVIIPQLHEVVTTVRNEPRP
EQESTPSSRHSTPPPIVTKEDEFSQLEEEVKSKKKKNVIAVNGLYLSVLSCQVAESPKEN
QKLLPDPILRLKRIIGFGGATAKCALWTMSGDSVVYPCHAIVVSMKIDSNEQRFFIGHTD
KVSALAFNGNTTLLASAQSGHYCVVRIWNYLKGNCMAMLRMQSHSVTSLSFSYSGSILCG
AGKDSRGKTVVVVWNTANVANGGEVSIFAKTKMDVDIQNMKIANFDETRLVSCGHDSIRL
WRVRKGTLRSCPVNLGEYGPLDFTDVAFEEGESPQQHLDDRLLFASCRSGHIFEIDYARV
VIRNVRWLFPVQQQEKWPLNKAPGIAINSLSVCSTFCATGSEDGFLRLWPLDFSAVVLEA
EHEGPVSLVSVSSDSTRVLTATFTANLGFLDVSSRGYNTLMRSHTGAVLGFSVDAIRQHL
TTASADGSVRIWSMDSLQQMFDFVSEDKPCSVAFHPSEQIFSCGFSSGVVRVFDISCGKL
LAEHDHHRGEVVGLAFSPDGDCMYSADSEGSLALYNSCDNDSPVIRVVCGVVAQGSGRAP
DALTVSCDSRCLAFVGPSEYTITIADALSLEESLRLDVSILDSESTFLDSAMKVCFSSAS
PEHLLVATSANKILWVNTKTGSLLRQVSKVHKHWCSSLAVSNDRRYLVTAGHNTIKVWDY
NMYLNMNSQTFIGHSQPINQVSFTPGQQGVVSVGDAIFLWDFLAHTADFPHTFRLSPGFP
SASAADEMPRDRAPLPASPPPPLDASVTDSTEVELDDDLSDGLSTPLVVTATDSEPSSHF
DPATTPFLKITELANSFRLSCKLPSHDFTGKKAVHPDCYRHFIPRFKTSTRDEMAVTPHP
GKAGMTLKSVIGYNGNGRGNLVWSPDQGVFAYSCGGVVVVENVNSGHQRHLQGHGEEISC
LAISNDAQILASAASKSASESLIRIWALQSGACLNTVSYHRGAVQSLTFSKDDRFFLSVG
DFSDPSVAVWCGATFRMLSSEGVLGPIHDAALSPSATCQLACVGSQGVYFGLFTDSGQDG
DLRLQRARAPVEVGDVELTSLSYHSDTLLFTATNRGHICAWDIKTQSCFMTWEADEGEIG
VLLCRANSLLTGSNTHWLRLWEVEAVPRRMKLLAKKKECLTSAVLKQEIMLDGTAVSATF
DNTMDMGIVGTTMGTLWYVDWSDNSSIRLVSGHNDKVNDLAFQADESHFATCSQDGSLRV
WTSPTNELVVQFQVLNQSCTCVCWSSSPGVQRVRVAAGYSDGTVRVFHLASAEMERKLHP
HRVAVTAIQYSANGDVILSGGKNGLIAVSRALDGSTIRVFRDHKGASIATIQCVREQCKD
FGLVGNELWLAASVDRRVSVWAADWFKCKCALLDWLTLPAPPYCQDDSPPPSLAAFCPTD
PGLLIYTGYGIEKELIFYSLYKKTIIKKIALPHWVTCFSLSSKSQLIALGSKERVLKLID
WTSGKFQDFLEHSDSLQTCRFSPSGTLLFSVAHNEILLWEVNGF
NT seq 5355 nt   +upstreamnt  +downstreamnt
atggccgccaaagatgattggcagcatcctttcgtcaacatattcaaacatttccggctt
ttggagtggcaaaaggcatccaaagaaggagatgtaacactatacaaggacaagaccctc
aacagtacagcgattcgaatcaggggtgctgtacctgacaacagttgcatacggattcct
aaaaacacgcaccagtctctgggtctaacaggacgatatttctacgtcctcttcaagccc
aatcctgcaaaaccatttttgatcgtcctggatgtcacagcagagcatgacacaaaggat
ggccgcgtgattcgcatctctatctccaacatgttcaaagagttcaagtttacctccacg
tcgcttctgttcccgttccagtgcggatctgaatttgattggatcaccgaaacggccaag
tttccacagcaacgttacagacctccagaagcccccaaggtcctctggacctgcctgacg
atggatctgcagcgtacactcgccacctacctcaaccatctctcttactgtcaccttaaa
agcgtcaagctctgcgcttacatgtctgttaaaaacgcttttaccagcgacctgctgctg
aatcccgaggtttcctaccgtgatgcaaagctgatgggcctgcccccttctgacggcgct
ggacctatgcccagagaaatgatgtttcctgtgcccaagggttccacctggcaaaattgc
tacaatcatatcaggttcccattagaaggagatctgaactgtggtatcatacgaaaaggt
ccttccaagatggagaccccaagcctcatggaagatgaacgccaatcccaaaacccagaa
ttagtgatcataccgcaattacatgaagtcgtcaccaccgtcaggaacgagccgcggccc
gagcaggaatcgacgccgtccagtcgacactctactccgccgccgattgtgactaaggag
gacgaattcagccaactcgaagaggaggtgaaaagtaaaaaaaaaaaaaatgtcattgct
gtaaatggtctgtacttatcagttttatcttgtcaggttgctgaaagcccaaaggaaaat
cagaagctgttgcctgatccgattctccggctcaagagaatcatcggttttggaggagcc
accgccaaatgtgccttatggaccatgtcgggcgattcggtggtctatccatgtcacgcc
attgtggtctccatgaaaatcgactccaacgagcagagattcttcattggccacaccgat
aaggtttctgctctggcttttaatggcaacactacattgttggcctccgcgcaaagtgga
cattactgcgtggttcggatatggaattacctcaaaggaaattgcatggctatgctcagg
atgcaatctcattcagtcacgtcactaagcttctcatacagcggcagcattttgtgcggt
gccggaaaagacagccgcggcaaaacggtggtggtcgtatggaacacggctaacgttgcc
aacggcggcgaagtgagcatctttgccaagaccaaaatggatgtggacattcaaaacatg
aaaattgccaactttgatgagacaaggctggtgtcgtgcggtcacgacagcattcgtctg
tggcgggtacgcaaaggcacactgcgctcctgcccggtcaacctcggtgaatacggcccg
ctggacttcaccgacgtggcctttgaggagggagaatcgccccaacagcatcttgacgat
aggctgctgtttgccagctgcaggagcggccatatttttgaaattgactacgcccgagtt
gtcattagaaatgtcagatggttgttccctgtgcagcagcaggagaagtggcctctcaat
aaagctcctggcatcgccatcaacagcctcagtgtgtgctcaaccttctgtgccactggc
tccgaagatggcttcctgcggctttggcctctggatttttccgctgtcgtcttggaagct
gagcacgagggtcccgtgagcctggtatctgtgtcatcagacagcacgcgcgtcctgacc
gccacctttaccgctaacctggggttccttgatgtgagcagtcggggttacaacacgctg
atgaggtcgcacacgggcgccgtgctcggcttcagcgtggacgccattcgccagcatctc
accactgcctcggccgacggctccgtgcgcatttggtccatggactccttgcagcagatg
tttgactttgtgtcagaggataaaccatgttcggtggcttttcacccaagcgagcagatc
ttctcctgtggattcagctcgggcgtcgtccgagtctttgatatctcctgtggcaagctc
ttggccgagcacgaccaccacagaggcgaagtggtgggcctcgccttctcccccgatggc
gactgcatgtacagtgctgactccgagggctccctggcgctctacaactcctgcgacaat
gacagccccgtcatccgagtcgtctgtggtgtggtggcccaaggcagcgggcgcgctccg
gatgctctcacggtgagctgcgacagccgctgtctggctttcgttgggccctcagagtac
accatcaccatcgccgacgcactgtcactagaagagtcgctccgtctggatgtgagtatt
ttggattcggagagcacctttctggactcggccatgaaggtctgcttctcctcagcctcc
cccgagcatttgttggtagcaacgtctgctaacaaaatcctctgggtcaacaccaagacg
ggcagtctgctccggcaggtgtccaaggtgcacaagcactggtgttcctctctggctgtg
agcaatgacagaagatatttggtcacggcgggacataatacaattaaagtgtgggattat
aacatgtatcttaatatgaactcgcagacgtttataggtcatagtcagcccatcaaccag
gtgagctttacccctggacaacaaggcgtggtctcagtgggggacgccattttcctttgg
gacttcctggcacacacagcggactttccgcataccttccgattgtcgccgggatttccg
tcagcctcagcagcggatgagatgcctcgagatagggcaccgctacccgcgtctcctccg
ccgccactggatgccagcgtcacagactccaccgaggtcgagctggacgatgacttgagc
gatggactgtcaactccactagtagtcacagccaccgattcagagccgagctctcatttc
gatcccgccaccacgcccttcttgaaaatcactgaactcgccaatagcttcagactgagt
tgcaaacttccaagccatgatttcactgggaagaaagcggtgcatccagattgttatcga
cacttcataccgcgatttaaaacttccactcgtgatgagatggctgtgactcctcatcca
ggcaaagcgggcatgacactgaagtcagtaatcggttacaatggcaacgggcgtggcaac
ctggtttggagccctgaccaaggtgtatttgcatactcatgcggaggtgtggtggtggtg
gagaatgtcaactcggggcatcagagacatttgcagggccacggggaagagatctcttgt
cttgccatctcaaacgacgctcagattttggcctctgccgcaagcaaaagtgccagcgag
agcctcattcgcatttgggccctccagagtggcgcttgtctcaataccgtttcctaccac
agaggggcagtgcagagtctcactttctccaaagatgatcgctttttcctctccgtagga
gacttctcagatccatcagtggctgtgtggtgcggcgccaccttccggatgctctccagt
gagggtgtgttggggccgatccacgacgcagccttgagcccctcggcgacctgccagctg
gcctgcgtaggcagccaaggggtttacttcggcctcttcaccgacagcggccaagatggt
gacctcagactccaaagagcgagggcaccagtagaggtgggcgacgtggagctgacgtct
ctgtcctaccattcagacaccttgctgttcactgcgaccaacagaggacacatctgtgct
tgggacatcaagacacaaagctgctttatgacatgggaggccgacgagggcgaaattggt
gtgttgctgtgtcgagcaaacagcctattgacaggcagcaacacccactggctgcgactg
tgggaggtcgaagctgtgccacggcgtatgaagcttctggccaagaaaaaagagtgcttg
acgtcagcggtgctaaagcaggagatcatgctggacggtaccgcagtcagcgccaccttt
gacaacacgatggacatgggcatcgttggaaccaccatgggaacattgtggtacgtcgac
tggtcggacaacagcagcattcgcctcgtcagcggccacaacgataaggtgaacgatttg
gcctttcaggcggatgagagccactttgccacttgcagccaagacggcagtctgagggtt
tggacgagccccaccaatgaattggtggtgcagttccaggtgctcaatcagtcgtgtacg
tgtgtgtgctggagttcgtctccaggcgtacagcgtgtgcgcgtggcggcgggctacagt
gacggcaccgtgcgagtctttcacctcgcctccgcagaaatggagcgcaaattgcatccc
caccgcgtcgcagtcaccgccatccagtactccgccaatggtgatgtgatcctgtctggc
ggcaagaatggtctcatagctgtcagccgcgccctggatggatcaaccatccgtgttttc
agggatcacaaaggagcgtccatcgccaccatccagtgtgttcgtgaacagtgtaaggac
tttggattagtggggaacgagctgtggttggctgccagcgttgacagacgcgttagcgtc
tgggcggctgattggttcaagtgcaaatgcgctttactcgactggctcacgcttcccgct
ccgccatattgccaggatgatagcccaccaccgagcctggcggccttctgcccaacagac
cccggcctgctcatctacacaggttacggaattgagaaagagctcattttctacagcctc
tacaaaaaaacgatcatcaaaaagatcgctttgcctcactgggtcacatgcttcagcctc
tcctccaagagtcaactcatagcattggggtcaaaagagcgggtattgaagctgatcgat
tggaccagcggcaagttccaggacttcttagaacacagcgactcgctgcagacgtgtcgt
ttctcgccttccgggacactcctcttttctgtggctcataatgagattctgctctgggag
gtgaatggcttctga

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