Syngnathus scovelli (Gulf pipefish): 125991490
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Entry
125991490 CDS
T08785
Symbol
wdr24
Name
(RefSeq) GATOR2 complex protein WDR24 isoform X1
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125991490 (wdr24)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125991490 (wdr24)
Membrane trafficking [BR:
sscv04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
125991490 (wdr24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
ANAPC4_WD40
zf-RING_16
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
125991490
NCBI-ProteinID:
XP_049615388
LinkDB
All DBs
Position
21:3068018..3072958
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AA seq
794 aa
AA seq
DB search
MEKMSRITTALGSSAISGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYVLEEEQFV
EKLNLRVGRKPSLNLSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVYMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTN
RAKEIYCVQTIASVARVKWRPERKFHLATCSMMVDHNIYVWDVRRPFIPFATFEEHKDVT
TGIVWRHQHDPHFLLSGSKDSTLYQHMFKDATRPVDKANPEGLCFGLFGDLAFAAKESLI
SGDANRKPYPGGDRRYPIFIFKKPDPTEQFAHVSSALSVFETDLDSNRMDWFVKTAQLYL
LGGKPFAELCDHNAKVARELKRPQVSTTWTMLRIMFSDPANITTPGPHLSKLGTLPLMNS
FSMKEIGTGMGNESRLERSKGDARQDNIHLEPENISNNNEENEETEGSEGQAEYMFGDAE
LDDDDLYSMEQDNPTDSCVYSTLAEEQECTLPQEAFQLRHDILDNPSAPEHLQQDKADSP
HVSGNEAEVTCLTPIESFSLISISQPLFTPDLPASFFCPIVREMLSYYAEKGDVQMAVSV
LIVLGERIRKEIDDLTQEHWYTSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQTSTTLH
INCSNCKRPMNNRGWICDRCHQCASVCAVCHHVVKGLFAWCQGCSHGGHLEHIINWLRSS
PHCPAGCGHLCEYT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgtcccggatcaccacagccctgggcagcagcgccatcagcggccgaacc
atgttctgccacttggacgcccccgccaacgccatcagcgtgtgccgtgacgccacgcag
gtggtggtagccgggcgcaacatcttcaagatctacgtgctggaggaggagcagtttgtg
gagaagctgaatctgcgcgtgggccgcaagccgtcgctcaacctcagctgcgccgacgtc
atgtggcaccagatggaggagaacctgctagccactgccgccaccaacggcgccgttgtg
acgtggaaccttggcaaaccgtctcgcaacaagcaggaccaactgttcacagagcacaag
cgtacggtcaacaaggtgtgcttccaccccaccgaggtgtacatgctgctgagtggctcg
caggacggcttcatgaagtgcttcgacctgcgcaagaaggagtctgtcagcactttctca
ggtcagtcagagagcgtgcgggacgtccagttcagcatgaaggactattttactttcgcc
gcttctttcgagaacgggaatgtccagctgtgggacatccgacggccagaccgctacgag
cgaatgttcaccgcccacactggcccggtgttctgctgcgactggcatcctgacgacagg
ggctggttggccacgggcggcagggataaaatggtgaaggtgtgggacatgaccacaaac
cgggccaaagagatctactgcgtccaaacaatcgcctcggtggctcgggtcaagtggcgc
ccggagcgcaaattccacctggctacctgctccatgatggtggatcacaatatttacgtg
tgggacgtgcggcgaccgttcatccccttcgccacctttgaggagcacaaggacgtgacc
acgggcatcgtgtggcgccaccaacacgaccctcacttcctactctcgggctctaaggac
agcacgctttaccagcacatgttcaaggacgccacgcggcctgtggacaaggccaacccc
gagggtctgtgtttcggcttgttcggcgacctggccttcgccgccaaggagagtctgatc
agcggcgacgcgaacaggaagccttaccctggcggcgaccggcgctaccccatcttcatc
ttcaagaaacccgacccgacggaacagtttgcgcatgtgtccagcgctctcagcgtcttt
gagacggacttggacagcaatcgtatggactggttcgtcaagacggcacaactctacctc
cttggcggcaagccgttcgccgagctgtgcgatcacaacgccaaggtggcccgtgagctc
aaaagacctcaggtttccacaacgtggaccatgctgaggattatgttctctgacccagca
aacatcaccactcctggtccccacctcagtaaacttggcaccttaccgttaatgaacagc
ttcagcatgaaggaaatcggaaccggaatgggcaatgaaagcaggctggagcgcagcaaa
ggtgacgccagacaagataatatccacttggaacctgaaaacatcagcaataataatgaa
gaaaacgaggagacggagggcagcgagggccaagccgagtacatgtttggcgatgccgaa
ctggatgacgacgatctttattcaatggagcaggacaacccgacagatagttgtgtctac
tcaacgctagctgaggaacaggagtgcacgctgccccaggaagccttccaactgcgccat
gacatcctggacaatccgtcggcccccgagcaccttcagcaggacaaggccgactcgccg
cacgtcagcggcaacgaggccgaagtcacgtgcctgacgcccatcgagtccttctcgctc
atctccatctcgcagccgctctttacgcccgacttgcccgccagcttcttctgccccatc
gtgcgcgagatgctcagctactatgccgagaagggcgacgtgcagatggcggtgtccgtg
ctcatcgttttaggagagcgcatccggaaagaaattgatgatctgacacaggagcactgg
tacacgtcctacatcgacctgctgcagcgcttcgagttgtggaacgtgtcaaacgaggtg
atcaagttgagtacgtgcagcgccatcacctgcctgaatcagacctccaccacgctgcac
atcaactgcagcaactgcaaacggcccatgaacaacaggggctggatttgcgacaggtgc
caccagtgtgccagcgtgtgcgccgtgtgccaccacgtggtcaagggactctttgcgtgg
tgtcagggctgcagtcacggcggccacctggagcacatcatcaactggctcagaagcagt
ccgcactgccccgccggatgcggacatctgtgtgagtacacctaa
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