Syngnathus scovelli (Gulf pipefish): 125991492
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Entry
125991492 CDS
T08785
Symbol
gabrb2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2a isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125991492 (gabrb2a)
04082 Neuroactive ligand signaling
125991492 (gabrb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125991492 (gabrb2a)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
GABA-A
125991492 (gabrb2a)
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
125991492
NCBI-ProteinID:
XP_049615397
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All DBs
Position
1:6335709..6374450
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AA seq
526 aa
AA seq
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MGRIRKNHFGILTFSLLVTFVWTQSVKDLKDPSNMPLVKETVDRLMNGYDIRLRPDFGGA
PVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWQDKRLSYSEIAYNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGEGAVSGVDRIELPQFSIVDYKLISTKVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGPQRQKKAAEKAATANNEKLRPDPN
KWLVGNVVQRDDALYARMKQREIDAYDSMWDPIFVDDAALGLGEQRNKMTPDDNILFSTL
EMKNEIGGAGDLSRGLGAPGDPRNTMLAYDSSTLQYRRAAMARQNYGHSALERHAQKKSR
LRRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYVH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaggatcaggaaaaaccactttgggattttgactttttccctgctcgtcactttt
gtctggacacaaagcgtcaaggatctaaaagatcccagcaacatgcctctggtgaaagag
acggtggacagactgatgaacggatacgacattcgattgaggcccgattttggaggtgca
ccagtggccgtgggcatgaacatagacatagccagcatagacatggtgtctgaagtcaac
atggactacacgttgaccatgtacttccagcaagcgtggcaggataagcggctctcctac
tccgagatagcctacaacctcactctggacaaccgagtggccgaccaactgtgggtcccg
gacacctacttcctcaacgacaagaagtcctttgtgcacggcgtcaccgtcaagaacagg
atgatccgcctgcatcccgacggcaccgtgctttatggactcaggatcaccacgactgca
gcctgcatgatggacctgcgccgttaccctctcgatgagcaaaactgcaccctggagatt
gaaagctatggctacactacagacgatatcgagttctactggcgaggaggagaaggcgcg
gtgtctggtgtcgacaggattgagttgccacagttttccatcgtcgactataaactcatc
tccacgaaggtggtcttctccacaggttcttatccccgcctgtccctcagcttcaaactg
aagaggaacatcggttacttcatcctgcagacatacatgccttccatcctgattaccatc
ctctcatgggtctccttctggatcaactacgatgcctctgccgccagagtggccctgggg
attaccacggtgctgaccatgaccaccatcaacacgcacttgcgagagacgctccctaag
atcccttatgtgaaggccatcgacatgtacctgatgggctgcttcgtgttcgtgttcctc
gccctgctggagtatgcctttgtcaactatatcttctttggccaaggcccgcagcggcag
aagaaagcggctgagaaggcggccacggccaataacgagaagcttcgacctgaccccaac
aagtggctggtgggaaatgtagttcagagagatgatgctctgtatgccagaatgaaacag
agggaaattgacgcgtatgactcgatgtgggatcccatctttgtggacgatgccgcatta
ggactaggcgagcaaagaaataagatgactcccgacgacaacatcctcttcagcaccctg
gagatgaagaatgaaattgggggcgccggagatctgtcccggggcctgggagcgcccgga
gacccccgcaacactatgctggcctacgacagctccacgcttcagtaccgcagggcggcc
atggcccgccagaactatggccacagcgccttggagcgccacgctcagaagaagtcgcgc
ctacggagacgagcctcgcagctcaaggtcaacatcccggacttgtccgacgtgaactct
attgataagtggtccaggatgatcttccccaccgtcttctccttcttcaacgtggtctac
tggctgtactacgtccattaa
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