KEGG   Syngnathus scovelli (Gulf pipefish): 125991508
Entry
125991508         CDS       T08785                                 
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sscv03036]
    125991508 (mms19)
   03400 DNA repair and recombination proteins [BR:sscv03400]
    125991508 (mms19)
Chromosome and associated proteins [BR:sscv03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    125991508 (mms19)
DNA repair and recombination proteins [BR:sscv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125991508 (mms19)
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N HEAT_ECM29
Other DBs
NCBI-GeneID: 125991508
NCBI-ProteinID: XP_049615429
LinkDB
Position
21:complement(5242437..5249276)
AA seq 1027 aa
MMAEKSVLVSLVEEFVSGLQDSKAKDTAAGLKNGEFTILQLVEALGLSLTSTQPQTRARG
IKLLSDVLEDVDLTEKEVEVLKAFYENRLGDDHITTPPVLQGLRILIQSPKLPPGAAVSI
LKSIFHNVYVRSLLLADRVALSKMLLNVMDTREAELKDFGADFVFGFIQSIDGESDPRNI
LLAFQIAKKIIQRGYSLDHYTEDLFDVTSCYFPVDFTPPPNDPRGITREELVQELRQVLT
GTPKFAQFLLPLIIEKLDSDVQSAKLDSLQTLAAGVATYEHEDLAEFLEGLWASLRREVF
QTSSEKIESAGLAALTAITSCLSRSIVKSDSEDALSTFLDMVLKDCKHHLSEPDLKLMWP
SAKLLQAACSASNRASHMIVAAVMPALIEQYNSKNQCSHRRTLLEVMLRFIQSVKSSESS
ENEERVLSGICPSLCCLTFAALSETNSSLQITATAMLMALARQSGLLEKAQIELAVDHLA
RLLLSDEDDAVSLAVVSCAGGLAELHPGVFISNMIPRMKKAIFSESMELDGESIKHTQSA
VRQRCLSMLAAVSAKPSVAQESTSVLLEVLDAAHSGKFGFSLEEAVLACISLKKIAELVE
DTQDSGRCFHDIIIPRLLSLALQAALKGESSSTHQSPLAEEAVLSTMVAIISTACSRLQP
TLAGQTAAKFVSLFLDGDVLFLPGNSFPPHIKLLANKQHDDSWKLSQTVCLLMACVCSLP
RTVAVPQLERLLSELEEMSCTCSHPMSYTSAAKCFAGLVNKIPSGDSLDSLLQKTMTRIL
NELNAAALGVRMQAFTLLIWVAKALLLRYHPTCTTLTDKLFSLLDDADLGSAAADSFSLL
MSDSADVLSRGCHADVRIMYRQRFFSENSAKLVQGFTAAPQEKKPNYLKALSNIVNKLPK
QVQVTELPALLSLLLEALTYPDQGVQLSTLSCLEPVIADPPPALIQQLEALMGRLLPLTS
APTMNVKIASLRCIYALSRFPEHEVLPFRARVLRALARPLDDKKRLVRKEAVQARGEWFL
LGSPGGR
NT seq 3084 nt   +upstreamnt  +downstreamnt
atgatggctgagaaaagtgtgctggtgtcacttgtggaggaatttgtctccggattgcaa
gacagtaaagccaaagatacagctgcaggtctcaaaaatggagagtttactattctgcag
ttagtggaagcattgggactgagtctgaccagcactcagcctcaaactcgagccagagga
attaagctgctctctgatgtgttagaagatgtagacctcactgagaaagaagttgaagtt
cttaaagcgttttatgagaaccgtctgggtgacgatcacataaccacaccacctgtcttg
caggggctcagaatacttatacaaagcccaaaattgcctcctggtgcagcagtttccata
ttgaagtctatctttcataatgtttatgttcggtcgctgctgctggctgaccgagtggct
ctctctaagatgctccttaacgtcatggacaccagagaggctgaattgaaagatttcgga
gcagactttgtttttggattcatccagtcgatagatggggagagtgaccctcgcaatatt
ctcttagccttccaaattgccaagaagatcatccaaagaggttacagtctggatcactat
acagaggatcttttcgatgtgacgtcctgctatttccccgttgattttaccccgcccccc
aacgaccctcgtggtatcaccagagaggaactggtccaagaactgaggcaagtcctcaca
ggaactcctaaatttgctcagtttctattgcctctcatcattgaaaagctggactcggat
gttcagagcgcaaagttggactctcttcagaccctggctgctggtgttgcaacgtatgaa
cacgaagatttggcagaattcctcgagggactgtgggcgtctttgcgcagagaggtgttc
caaacctcaagtgaaaaaattgagtcggcaggcctcgctgctcttaccgccatcacttcc
tgtctttctcgttcgattgttaagtcagattctgaagacgccctcagcactttcttggat
atggttctgaaagactgcaagcatcatctgagcgagccggacctgaagctaatgtggccc
agcgctaagctactccaggctgcttgcagcgcttccaacagggcgagtcacatgatcgtc
gcggcagtcatgccggcgctcatcgagcagtacaacagcaaaaaccagtgttcacataga
cgcacattattggaggtgatgctgcggtttattcagtctgttaagagcagcgagtcatca
gaaaacgaggagcgagtgctctctggcatctgcccgtcgttgtgctgcctcacttttgca
gctctttcggagactaacagcagcctgcagatcacagctacggctatgctcatggcactg
gcacgacaaagcggtttgttagaaaaggctcaaatcgagctggctgtcgatcatttggct
cgactgttgctgtccgatgaagacgacgcagtcagtctcgctgtggtatcatgtgccgga
ggcttggcggaactgcacccgggtgttttcatcagcaatatgatcccgaggatgaagaaa
gccatcttttctgagtcaatggagctagacggagagtccataaaacacacgcagtctgca
gtgcgccagcgctgtttgtccatgttggcggcagtttccgccaagcccagtgtcgcgcag
gagagcacgtcagtcctcttggaagtcctcgatgcagcacattctggcaaatttggtttc
tcattagaggaggccgtgttagcgtgcatcagcttaaagaaaatagccgagctggtggaa
gacacccaagactccggccgatgcttccatgacatcatcatcccgcgactgctttcacta
gcacttcaagcagcgcttaaaggtgagagttcatctactcaccagagtcctctggcagag
gaggcggtcctttccaccatggtcgcaatcatcagcacagcttgctccaggctgcaacca
acactggcgggccagacggcagcgaagtttgtctctctcttcctggatggtgacgtcctc
tttctgcccggcaactctttcccgccacacatcaagttgctggcaaataaacagcacgat
gactcttggaagctatctcagacggtttgtctgctgatggcatgcgtgtgctctttacct
cgcactgtggcggtgccccaattggagcggctgctttcagagctggaagagatgagttgc
acttgcagccacccgatgtcatacacctccgctgcaaagtgtttcgctggcctggtcaac
aagatcccttcgggcgactctcttgacagtctactccaaaagacaatgaccagaattttg
aacgagttgaacgcagcagctttaggtgttcgcatgcaggcgttcactctcttgatatgg
gtggccaaggctctgcttctccgctaccacccaacatgcacaacactgactgacaagctc
ttctcgctgctggatgacgccgatctgggctcggcggcagctgacagcttctcgctgctg
atgagcgactccgccgatgtccttagccgcggttgccacgcagatgttcgcatcatgtac
cgccaacgcttcttcagcgagaactcagccaagctggtgcaaggtttcaccgcggctcct
caagagaagaaaccaaactacctgaaggctctgtccaatatagtcaacaaactacccaag
caggttcaagttactgaactaccagcgctgctgtcactgttgctcgaggccttgacgtac
cccgaccagggcgtccagctttccacgctgtcctgtctggagcctgtcattgctgacccg
ccaccggcgctcatccaacagcttgaagctttgatgggcagactgctgcccctcacgtcc
gctcccaccatgaatgtcaagatcgcatcactgcggtgtatctacgccctttcccgcttc
cctgagcatgaggttttgccatttcgggcccgagtgctgcgagccttggccagacctctg
gatgacaagaagaggctagtgaggaaggaggcggttcaggcgcgaggagagtggttcctc
ttgggaagtcctggaggaaggtga

DBGET integrated database retrieval system