Syngnathus scovelli (Gulf pipefish): 125991508
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Entry
125991508 CDS
T08785
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125991508 (mms19)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125991508 (mms19)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125991508 (mms19)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125991508 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
125991508
NCBI-ProteinID:
XP_049615429
LinkDB
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Position
21:complement(5242437..5249276)
Genome browser
AA seq
1027 aa
AA seq
DB search
MMAEKSVLVSLVEEFVSGLQDSKAKDTAAGLKNGEFTILQLVEALGLSLTSTQPQTRARG
IKLLSDVLEDVDLTEKEVEVLKAFYENRLGDDHITTPPVLQGLRILIQSPKLPPGAAVSI
LKSIFHNVYVRSLLLADRVALSKMLLNVMDTREAELKDFGADFVFGFIQSIDGESDPRNI
LLAFQIAKKIIQRGYSLDHYTEDLFDVTSCYFPVDFTPPPNDPRGITREELVQELRQVLT
GTPKFAQFLLPLIIEKLDSDVQSAKLDSLQTLAAGVATYEHEDLAEFLEGLWASLRREVF
QTSSEKIESAGLAALTAITSCLSRSIVKSDSEDALSTFLDMVLKDCKHHLSEPDLKLMWP
SAKLLQAACSASNRASHMIVAAVMPALIEQYNSKNQCSHRRTLLEVMLRFIQSVKSSESS
ENEERVLSGICPSLCCLTFAALSETNSSLQITATAMLMALARQSGLLEKAQIELAVDHLA
RLLLSDEDDAVSLAVVSCAGGLAELHPGVFISNMIPRMKKAIFSESMELDGESIKHTQSA
VRQRCLSMLAAVSAKPSVAQESTSVLLEVLDAAHSGKFGFSLEEAVLACISLKKIAELVE
DTQDSGRCFHDIIIPRLLSLALQAALKGESSSTHQSPLAEEAVLSTMVAIISTACSRLQP
TLAGQTAAKFVSLFLDGDVLFLPGNSFPPHIKLLANKQHDDSWKLSQTVCLLMACVCSLP
RTVAVPQLERLLSELEEMSCTCSHPMSYTSAAKCFAGLVNKIPSGDSLDSLLQKTMTRIL
NELNAAALGVRMQAFTLLIWVAKALLLRYHPTCTTLTDKLFSLLDDADLGSAAADSFSLL
MSDSADVLSRGCHADVRIMYRQRFFSENSAKLVQGFTAAPQEKKPNYLKALSNIVNKLPK
QVQVTELPALLSLLLEALTYPDQGVQLSTLSCLEPVIADPPPALIQQLEALMGRLLPLTS
APTMNVKIASLRCIYALSRFPEHEVLPFRARVLRALARPLDDKKRLVRKEAVQARGEWFL
LGSPGGR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgagaaaagtgtgctggtgtcacttgtggaggaatttgtctccggattgcaa
gacagtaaagccaaagatacagctgcaggtctcaaaaatggagagtttactattctgcag
ttagtggaagcattgggactgagtctgaccagcactcagcctcaaactcgagccagagga
attaagctgctctctgatgtgttagaagatgtagacctcactgagaaagaagttgaagtt
cttaaagcgttttatgagaaccgtctgggtgacgatcacataaccacaccacctgtcttg
caggggctcagaatacttatacaaagcccaaaattgcctcctggtgcagcagtttccata
ttgaagtctatctttcataatgtttatgttcggtcgctgctgctggctgaccgagtggct
ctctctaagatgctccttaacgtcatggacaccagagaggctgaattgaaagatttcgga
gcagactttgtttttggattcatccagtcgatagatggggagagtgaccctcgcaatatt
ctcttagccttccaaattgccaagaagatcatccaaagaggttacagtctggatcactat
acagaggatcttttcgatgtgacgtcctgctatttccccgttgattttaccccgcccccc
aacgaccctcgtggtatcaccagagaggaactggtccaagaactgaggcaagtcctcaca
ggaactcctaaatttgctcagtttctattgcctctcatcattgaaaagctggactcggat
gttcagagcgcaaagttggactctcttcagaccctggctgctggtgttgcaacgtatgaa
cacgaagatttggcagaattcctcgagggactgtgggcgtctttgcgcagagaggtgttc
caaacctcaagtgaaaaaattgagtcggcaggcctcgctgctcttaccgccatcacttcc
tgtctttctcgttcgattgttaagtcagattctgaagacgccctcagcactttcttggat
atggttctgaaagactgcaagcatcatctgagcgagccggacctgaagctaatgtggccc
agcgctaagctactccaggctgcttgcagcgcttccaacagggcgagtcacatgatcgtc
gcggcagtcatgccggcgctcatcgagcagtacaacagcaaaaaccagtgttcacataga
cgcacattattggaggtgatgctgcggtttattcagtctgttaagagcagcgagtcatca
gaaaacgaggagcgagtgctctctggcatctgcccgtcgttgtgctgcctcacttttgca
gctctttcggagactaacagcagcctgcagatcacagctacggctatgctcatggcactg
gcacgacaaagcggtttgttagaaaaggctcaaatcgagctggctgtcgatcatttggct
cgactgttgctgtccgatgaagacgacgcagtcagtctcgctgtggtatcatgtgccgga
ggcttggcggaactgcacccgggtgttttcatcagcaatatgatcccgaggatgaagaaa
gccatcttttctgagtcaatggagctagacggagagtccataaaacacacgcagtctgca
gtgcgccagcgctgtttgtccatgttggcggcagtttccgccaagcccagtgtcgcgcag
gagagcacgtcagtcctcttggaagtcctcgatgcagcacattctggcaaatttggtttc
tcattagaggaggccgtgttagcgtgcatcagcttaaagaaaatagccgagctggtggaa
gacacccaagactccggccgatgcttccatgacatcatcatcccgcgactgctttcacta
gcacttcaagcagcgcttaaaggtgagagttcatctactcaccagagtcctctggcagag
gaggcggtcctttccaccatggtcgcaatcatcagcacagcttgctccaggctgcaacca
acactggcgggccagacggcagcgaagtttgtctctctcttcctggatggtgacgtcctc
tttctgcccggcaactctttcccgccacacatcaagttgctggcaaataaacagcacgat
gactcttggaagctatctcagacggtttgtctgctgatggcatgcgtgtgctctttacct
cgcactgtggcggtgccccaattggagcggctgctttcagagctggaagagatgagttgc
acttgcagccacccgatgtcatacacctccgctgcaaagtgtttcgctggcctggtcaac
aagatcccttcgggcgactctcttgacagtctactccaaaagacaatgaccagaattttg
aacgagttgaacgcagcagctttaggtgttcgcatgcaggcgttcactctcttgatatgg
gtggccaaggctctgcttctccgctaccacccaacatgcacaacactgactgacaagctc
ttctcgctgctggatgacgccgatctgggctcggcggcagctgacagcttctcgctgctg
atgagcgactccgccgatgtccttagccgcggttgccacgcagatgttcgcatcatgtac
cgccaacgcttcttcagcgagaactcagccaagctggtgcaaggtttcaccgcggctcct
caagagaagaaaccaaactacctgaaggctctgtccaatatagtcaacaaactacccaag
caggttcaagttactgaactaccagcgctgctgtcactgttgctcgaggccttgacgtac
cccgaccagggcgtccagctttccacgctgtcctgtctggagcctgtcattgctgacccg
ccaccggcgctcatccaacagcttgaagctttgatgggcagactgctgcccctcacgtcc
gctcccaccatgaatgtcaagatcgcatcactgcggtgtatctacgccctttcccgcttc
cctgagcatgaggttttgccatttcgggcccgagtgctgcgagccttggccagacctctg
gatgacaagaagaggctagtgaggaaggaggcggttcaggcgcgaggagagtggttcctc
ttgggaagtcctggaggaaggtga
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