Syngnathus scovelli (Gulf pipefish): 125991509
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Entry
125991509 CDS
T08785
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125991509 (vps35l)
Membrane trafficking [BR:
sscv04131
]
Protein recycling
Others
Retriever complex
125991509 (vps35l)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
125991509
NCBI-ProteinID:
XP_049615430
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All DBs
Position
21:complement(5231051..5238072)
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AA seq
964 aa
AA seq
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MATVMWRSRWRDYDAELQRTRLEAMPLEFSDSHPLKPILVTESKARRGTRKGSTSSSSSC
SSLAASDPLSSMLDGTDPLSMFAAETPSMTHVAFAGDARKKGEREDEPVGADFEPWSMKR
GEILARFTTTEKLSINLCLGSDKGNSQNPGSSAVSEKVRTRLEELDDLEEGSQRELLNLS
QQEYANRIQELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDT
FGQLVYDRIWSMCSDPKPLPDSFTASDVNDTAKETCLNWFFKIASIRELLPRLYVEASIL
KCNRFLNKSGIQDTLPRLTAMIRGIGDPLVAAYTRAYLCRVGMEVAPSLKDSLKRNFFDL
LGTFRQINGESVRSQLLAQRVEMPEYLTLYSPAINWILHCSAYRAPESVLTEMMERCKKL
GNNALLLNSVMRAFRPEFVATRAMDFIGMIKDCDEAGFPKHLLFGSLGRCLACADPPESE
RLTILNEAWKVITKVRNPRDYVNCAEIWVEFTCRNFTKREVNTVLADIIKHMTPDRAFED
AYVQLQSVIRKILAHFHDFSVLFSMERFLPFLDMFQKDGVRVEVCKSIMDVFIRHQVEPT
RDPVILNAVMHICKTMHDSVNALTLEDEKRSSSVLIIGFMRVVSFGRDFEQQLSFCVEAR
ATFCNLEPVLVHLIHTVNQLAMETRRVMRGNHSRKTAAFVRACAAYSFITIPSLSSIFSR
LHLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRSISVEGKLRSSESFLLDFVNNFLA
TLLVVPDHPEHGVLYLVRGVLNMVQDYAWEDNSDAKVRVYISALPLLAAMSQETYLYTIP
KVDSNETLYGGDPKFLTEINKLCETLIGQILDHLKALGREDQLSTRRQGALAFSLFCILL
AHGDLRNNKLSQLAVNLWNLSHKHGHCETRISVRTLESMKHQALQADMSHLSETVQRLAL
QSRT
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtgatgtggcgctcccggtggcgtgactatgacgctgagctgcagaggacc
cgtctggaagcaatgccacttgaattctctgactcccatcccctcaaacctattttagtg
acagaaagcaaagctcgccgtggaactcgcaagggcagcacctcctcctcctcgtcctgc
tcttccttagcggcgtcggaccccctcagctctatgctggacggaaccgatccactgtcc
atgtttgcggctgaaactccgtccatgacacacgttgccttcgccggggatgcgaggaag
aaaggggagagggaggacgagccagtgggagccgattttgagccctggtcgatgaagcga
ggcgagatcctggcgaggtttaccaccactgaaaaactctcaattaatctatgcttgggc
tccgacaaaggaaattcacagaatcccggatcctctgctgtgtcagagaaggtccgcact
cggctggaggaactggatgatctggaagagggttcccagagagagctcctcaatctctcc
cagcaagaatatgccaaccgcatccaagagctgaaccagtctctcaaagaggcctgggcc
tcggaccaaaaggtcaaagcactgaagatcgtaatccagtgctccaagctcctctcggac
acctccgtaatccagttttacccaagcaagtttgtcctcatcactgacatacttgacact
tttggccagctcgtgtatgacagaatttggagcatgtgttcagatccgaaacctttacca
gactcatttacagcgagcgatgtcaacgacacagccaaggaaacgtgcctcaactggttc
ttcaaaatcgcctccattagagaactcttaccccgattatacgtggaagcctccatcctc
aagtgcaatcgcttcctgaacaaatccggtattcaggacactctcccacgactgaccgcc
atgataagagggatcggcgaccccttggtggcggcttacacccgagcttacctctgcagg
gttggcatggaagtagccccaagcttgaaagacagcctgaagcgcaacttcttcgacctg
ctcggaaccttccggcagatcaacggggagagtgttcgcagccagctgctcgcacagaga
gtggagatgcccgagtacctgactctctactcgcctgctatcaactggatcttgcactgt
agtgcctacagagcaccggagagtgtcctgacagaaatgatggagagatgtaagaagctg
ggtaacaatgccctgctgctgaattcagtgatgagggcatttaggcccgagtttgtcgcc
acaagagccatggatttcatcgggatgataaaagactgcgacgaggccggattccccaag
catttattatttggatcactgggtcgctgtctggcttgcgctgaccctccagaatcagag
aggctgaccatcctcaacgaagcctggaaagtcatcaccaaagtccgcaatcctcgggat
tatgtcaactgtgctgagatctgggtggagttcacctgccgaaatttcacaaaacgtgag
gtgaacaccgttctggcagacatcatcaaacacatgactcccgaccgagcctttgaggac
gcctacgttcagctgcagtctgtaatcaggaagatcctcgcccacttccacgacttctca
gtcctcttttccatggagcgtttcctcccatttctggacatgtttcaaaaagacggtgtg
agggtggaagtgtgcaaatccatcatggatgtcttcatcagacatcaggtggagccaact
agagacccggtcatcctcaacgccgtgatgcacatctgcaagaccatgcatgattctgtc
aacgctctcaccctcgaggatgaaaaaagatcttcgtcggtgctcatcatcggctttatg
cgcgtggtttcctttggccgagactttgagcaacagttgagtttctgcgtggaggccaga
gccacattctgcaacctggagcccgtcctggttcatcttattcacacggtgaatcagcta
gcgatggagaccagaagggtgatgcgtggaaatcattcccgcaaaaccgccgcattcgtc
cgggcatgtgccgcctacagttttatcaccatcccgtcactcagcagcatcttcagtcgt
ctccatctttatctgctgtctggccaggttgcgttggccaaccagtgtttatcccaagcg
gatgctttcttaaaagcagcagttagtatccttccggaggtgccacgttccatcagcgtg
gaagggaagcttcgctcttcggagagtttcctgctcgactttgtcaacaacttcctggct
acgcttctagtcgtcccggatcatccagaacatggtgtgctctacttagtccgaggtgtg
ctcaacatggtgcaggattacgcttgggaggacaacagtgatgccaaagtgcgcgtgtac
atctccgccctccccctgctggctgccatgagccaggaaacatatctgtacacaattcca
aaagtggactcaaatgagaccctatacggcggagacccaaaattcctcacggagattaac
aaactgtgcgagaccctgatcgggcagatcctggaccacctgaaggctctcggtcgagag
gatcagttgagcactcgccgccaaggcgctttggccttctcgctcttctgcatcctgctc
gctcatggagacctgaggaacaacaagctgagccagctggccgtcaatttgtggaatctc
agtcacaaacatggacactgtgagacgcgaatttctgttcgaacactggagtccatgaag
catcaggcgctccaggctgacatgtctcacctgtcggaaacggtccagaggctcgcattg
cagtctcgtacttga
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