Syngnathus scovelli (Gulf pipefish): 125991554
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Entry
125991554 CDS
T08785
Symbol
pelo
Name
(RefSeq) protein pelota homolog
KO
K06965
protein pelota
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125991554 (pelo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125991554 (pelo)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125991554 (pelo)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
Motif
Other DBs
NCBI-GeneID:
125991554
NCBI-ProteinID:
XP_049615524
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Position
21:complement(8597214..8599777)
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AA seq
385 aa
AA seq
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MKLLHRDIEKDNAGQVTLMPEEAEDMWHTYNLLQQGDSLRASTIRKVQTESTTGSVGSSR
VRTTLTLCVETIDFDTQACQLRVKGTNLEENQYVKMGAYHTIELELNRKFTLAKKSWDSI
VLARIDEACDATQKADVAAVVMQEGLANLVLVTPAMTLLRAKVELTIPRKRRGSCTQHEK
ALERFYEAVMQAILRHVNFDVVKCILVASPGFVKDQFMTYLFKEAVRQDNKILLENRPKF
MMVHSSSGHKYSLKEILSDPTVTNRLSDTKAAGEVKALEDFYKMLQHEPDRAFYGVAHVE
RAAEALAVDTLLISDKLFRHQDVPTRARYVRLVDKVKDSGGNVRIFSSLHVSGEQLTQLS
GVVAILRFPIAEVSEGEEDSSSDDD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctccacagagatattgaaaaagataacgccggtcaggtgactctgatgcca
gaagaagcagaggacatgtggcacacctacaacctgctgcaacagggggacagtttgaga
gcgtccactataagaaaagtacagacagaatccacgacaggaagtgtgggcagctcaaga
gtaaggacaactttgacgttatgcgtggagaccattgactttgacactcaggcatgccag
ctgagagtcaagggcaccaatcttgaggagaaccagtatgtcaagatgggggcgtaccac
actattgagctggagctcaacaggaagttcacgcttgctaaaaagagctgggacagcatt
gtgttggccagaatcgacgaggcctgcgacgccacgcagaaggcggacgtggccgcggtg
gtgatgcaggagggcttagccaacctggtgctggtgacccccgccatgacgcttctgcgg
gccaaagtggagctcaccattcctcgcaagaggagggggagctgcacccagcacgagaag
gctttggaaaggttctacgaagcggtcatgcaggccatacttcgccacgttaactttgat
gtggtgaaatgcatcctggttgctagtccaggtttcgtgaaggaccagttcatgacgtac
ctttttaaagaggccgtgcgacaggacaacaagattctgctggagaaccgacccaagttc
atgatggtccactcgtcatctggtcacaagtactccctcaaagaaatcctttcagacccc
acagtgacaaacagactgtcagataccaaggctgccggagaggtgaaagccctggaggac
ttttacaagatgctccaacatgagcctgaccgagctttttatggagtcgctcacgtggaa
cgagccgcagaagccctcgccgtcgacactttactcatcagtgataagctcttcaggcat
caggacgtgcctacgagggcacgctacgttcgccttgtggacaaagtgaaagacagcgga
ggcaatgtcaggatcttctcaagccttcacgtctccggtgaacaactgacccaactgagc
ggagtggtggccatcttgcgctttcccatcgccgaagtttcggagggcgaagaggacagt
agctcggatgacgactga
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