Syngnathus scovelli (Gulf pipefish): 125991563
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Entry
125991563 CDS
T08785
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125991563
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125991563
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125991563
Peptidases and inhibitors [BR:
sscv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125991563
Ubiquitin system [BR:
sscv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125991563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
125991563
NCBI-ProteinID:
XP_049615536
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MTIVDRSSENSDHESVGCKRSPFTSGDGMDSSCSSSWAVGPTLPTDSPRLKVPGGCLGPT
PGAVVYNSTPPSVDRPKEHVLCSGDGIDMPQKVLFSPERLSLKWNQVHRIGAGLQNMGNT
CFLNSALQCLTYTPPFANYMLSREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVFKPLGV
LNELKRIAKHFRYGSQEDAHEFIRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLRS
RVKCLNCKAVSDTFDPFLDITLEIKMAPSVSKALEQFVKPEQLDGENAYKCSKCKKMVTA
SKRFTIHRSSNVLTLSLKRFANFSGGKITKDVKYPEYLDLRPFMSQSQGEPQLYGLFAVL
VHSGFSCHAGHYFCYIKASNGQWFQMNDSSVTVSDIRSVLNQQAYVLFYIKSSDGKKEGD
YGHMTHNSVAPGQSSPRPVVIPRINTTAHHNNNGGFIGPQLPPHMNKNSLHMNGNGSLRE
CPKPSTSSSIAGKPNHGAASSSSTSHLASQPSAIPEHEKRLKLSFCIGQGKPNRPAASSS
SSSSASSSTATSSSSSLPSSSQSTSEARFIPRQVNHVNGTPSSNGEHQAGGNGSSFLVPY
GQELSEESDQENGGSLDNGCSVESHMNGNKRTREDFANGDSGVHHNGNGVNGISHSVSKN
IQNGHHHGLQKVNGHNSVEKISVSSEGSLSSEGSSTVNGVDTDYSQPSKESSSSQASSVP
RVQPAASESQKLSPDVRATRVADPPPEQTACETSSASTSKNHSSASSESASISPPATSPN
SSHSTSGTCAALPKSPDEVTNAPLTNGSSAAASKGRAEGRDHLRASPPSRSYERQSSRER
GRDRPYSSDWSRDRERNYNRSQEWDATHYRRDNRDHHYNHHRSYRDYYYRDWESERRWDR
TPYHPRERDHDRCSHHYHFYHHHHRSREDRDYQRRGYGNSYRHKSHGQWRRDQDNWEVRG
MRDDGRERDHHHLYRGTPPNRSPYRHAHPGSEDQNPRRSGRSVSSEERHSKKHKKSKKKK
SKDKERHRESGSSDSDRGYEVKKKKKRRHQSEQRSPDGGHKGRSSEERECRKRRHSKDAK
QDEDSCSPNKRRRLDYDHNGTSPAGPAHGPFHSHLNGYAGNGYSQTNVVSH
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgttgacagatcctccgaaaattctgaccacgagtcagtcggttgcaagaga
tcccccttcaccagtggagacgggatggacagcagctgttccagcagctgggcagtgggt
cccaccctgcccactgactcaccgcggctgaaggttccggggggctgcttgggcccgacg
cctggcgccgttgtctacaatagcacgcctccctccgtggaccggcccaaggagcatgtg
ttgtgcagcggcgatggcattgacatgccgcagaaggtcctcttctctcccgagcgtctt
agcctaaaatggaaccaggttcatcgcataggcgccggcctgcagaacatgggcaacact
tgtttcctcaactcggccctccagtgtctcacctacacgccgccatttgccaactacatg
ctgtcacgggaacactcgaaaacatgtcacgagccaggcttctgtatgatgtgcaccatg
caaaaccacatcattcaagtttttgccaactctgggaacgtttttaagccacttggtgtg
ctgaacgagctcaaaagaatcgcgaagcacttccgctatggaagccaggaggatgcccat
gaatttattaggtacacggtggatgctatgcaaaagtcctgcttgcctggaaccaaattg
gacaggcaaacgcaggcgaccacttttattcatcaggtatttggtggttacctaaggtcc
agagttaaatgtttaaactgcaaagcagtctctgatacatttgacccttttctggacatc
actctagaaatcaaaatggcacccagtgtttcgaaggctcttgagcagtttgtcaagcca
gagcagctggatggcgagaatgcctacaagtgctccaagtgcaaaaaaatggtcacagcc
tcaaagagattcacgatccatcgcagctccaatgtcctcaccctgtcgctgaaacgcttc
gccaacttcagtggaggaaaaatcacaaaagatgtgaaatatcccgagtacctggacctg
cggcccttcatgtcgcagtcgcaaggagagccacaactctacgggctgtttgcagttctg
gtccattctggattcagctgccacgctggacactacttctgctatattaaggcaagcaat
ggtcagtggtttcagatgaacgattcgtctgtgactgtaagcgacattaggtctgttctt
aaccagcaggcttatgtcctcttctacatcaagtccagtgacggaaagaaagaaggggac
tatggtcacatgacccataactcagttgcacccggccagtcatcacctcgacccgtagtg
attccccgcatcaacaccaccgcccatcacaacaacaatggcggcttcatcggaccacag
ctgcccccgcacatgaacaagaattctctccacatgaatgggaacgggtctttgagggag
tgtcccaagcccagcaccagcagcagcattgctggaaaacccaaccacggcgcggcctcc
tcttcttccacgtcgcacttggccagccagccttcagcgatcccagagcacgagaagcgc
ctgaaactgtccttctgcatcggccaaggcaaaccgaatcgtccggcggcgtcctcctcc
tcctcgtcatcggccagcagctccaccgccacctcgtcctcgagctctttaccctcctcc
tcccagtctacctcagaggctcgcttcatcccacgtcaggtgaaccacgtcaacggcacg
ccgagcagtaacggggagcaccaggccggcgggaacggctcgtccttcttggtgccgtac
ggccaagaattgtcggaagagtcggatcaagagaacggcgggtccctggataatggctgc
tcagtggagagtcacatgaatggtaacaaaagaacaagggaggactttgccaatggcgac
tctggcgtgcaccacaatggaaacggtgtaaatggaatttctcacagcgtatctaaaaac
atacaaaacggacaccatcatggacttcaaaaagtcaatggtcataatagtgttgaaaag
atctcggtcagtagtgagggaagtttgtcatcagagggaagttcgactgtgaatggagta
gacactgattactctcaaccaagcaaagagtcgtcgtcatcccaggctagttctgttccg
agggtccaacccgccgccagcgaaagccagaaactctcccccgacgtaagggcgacacga
gtggccgatcccccgcctgagcaaacggcctgcgaaacctcctccgcttccaccagcaaa
aatcattcctcggcatctagcgagtccgcgtccatcagtcccccagccacctcgcccaac
tcctcccacagcaccagcggcacgtgtgcggctctaccgaagagtcccgatgaagtcacg
aatgccccactgaccaacggctcatcggcggcggcctccaaaggccgtgcagaggggaga
gatcatctccgggccagtccgccttccagaagctacgaaagacagtcatcgcgggaaagg
ggtcgggaccggccgtactcatctgactggagcagggacagagagcgaaactacaacagg
agtcaggaatgggacgcaactcactatagacgggacaacagagaccaccattacaaccac
caccgctcatacagggactattactaccgggactgggagagcgaacgtcgctgggacagg
actccctaccaccctagggagcgggaccacgaccgctgctcgcaccactaccacttttat
caccaccaccaccgatccagggaagaccgcgattaccagcgcaggggttacggcaactcg
taccgccacaaatctcacggccaatggaggcgggatcaggacaactgggaagttcgcggg
atgagggacgatggcagggaaagggaccaccaccacctctatcgggggacaccgcccaac
aggtcgccgtatcggcacgctcatccggggtcggaggaccagaatcctcggcggagtggt
cgctctgtgagctctgaggagcggcatagcaaaaaacacaaaaagagcaagaagaagaaa
tcaaaggataaagaacgacaccgtgagagtgggagctccgactcagaccgaggctatgaa
gtaaaaaaaaagaaaaagaggcggcaccagagcgagcaacgcagcccagacggtggccac
aagggccgcagcagcgaagaacgcgagtgtcgcaaacgccgtcactccaaggatgccaag
caagacgaggacagctgctcaccgaacaaacgccgccgcctcgactacgaccacaacggc
acctcccccgccggacctgcacacgggccatttcacagtcaccttaatggatacgcagga
aacggttacagccaaaccaacgttgtatcccactga
DBGET
integrated database retrieval system
