Syngnathus scovelli (Gulf pipefish): 125991571
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Entry
125991571 CDS
T08785
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04145
Phagosome
sscv04148
Efferocytosis
sscv04310
Wnt signaling pathway
sscv04370
VEGF signaling pathway
sscv04510
Focal adhesion
sscv04520
Adherens junction
sscv04530
Tight junction
sscv04620
Toll-like receptor signaling pathway
sscv04810
Regulation of actin cytoskeleton
sscv05100
Bacterial invasion of epithelial cells
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125991571
04310 Wnt signaling pathway
125991571
04370 VEGF signaling pathway
125991571
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125991571
04148 Efferocytosis
125991571
09144 Cellular community - eukaryotes
04510 Focal adhesion
125991571
04520 Adherens junction
125991571
04530 Tight junction
125991571
09142 Cell motility
04810 Regulation of actin cytoskeleton
125991571
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125991571
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125991571
05100 Bacterial invasion of epithelial cells
125991571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125991571
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125991571
04031 GTP-binding proteins [BR:
sscv04031
]
125991571
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
125991571
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
125991571
Macropinocytosis
Ras GTPases
125991571
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
125991571
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125991571
Exosomal proteins of other body fluids (saliva and urine)
125991571
Exosomal proteins of colorectal cancer cells
125991571
Exosomal proteins of bladder cancer cells
125991571
GTP-binding proteins [BR:
sscv04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
125991571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
CagD
Motif
Other DBs
NCBI-GeneID:
125991571
NCBI-ProteinID:
XP_049615551
LinkDB
All DBs
Position
21:complement(5620889..5624436)
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLGPIIYPQGLAMAKEISAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRRRKCSVL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccattaagtgtgtggtggtgggtgacggggctgtgggtaaaacctgcctgctc
atcagctacactaccaatgctttccctggagagtacatccccactgttttcgacaactat
tccgccaatgtgatggtggacggtaagccggtaaacctcggcctctgggatactgcagga
caggaggactacgaccgactcaggccactgtcctacccacaaaccgatgtctttctgatt
tgcttctcactagttagccccgcttcatttgaaaatgtccgggccaagtggtaccctgag
gtaagacaccactgccccaacacccccatcatcctggtgggcaccaaactcgacctgaga
gacgacaaggacaccatcgagaagctcaaggagaagaaactcgggcccatcatttaccct
cagggcttggccatggcgaaagaaataagtgccgtaaagtatctagagtgttcagctttg
acacagcgcggccttaaaacggtgtttgacgaagccatccgggcggtcctctgcccaccg
cccgtcaagaaaagaagaaggaagtgcagcgttttgtaa
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