Syngnathus scovelli (Gulf pipefish): 125991733
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Entry
125991733 CDS
T08785
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3
KO
K12485
Rab11 family-interacting protein 3/4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125991733 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125991733 (rab11fip3)
Membrane trafficking [BR:
sscv04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125991733 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
Macoilin
EF-hand_9
WD40_alt
2-thiour_desulf
ZapB
Motif
Other DBs
NCBI-GeneID:
125991733
NCBI-ProteinID:
XP_049616031
LinkDB
All DBs
Position
21:6014395..6027951
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AA seq
1021 aa
AA seq
DB search
MEPTVVSSPLGHAQWESEQSFPLGFLTLDSDNGGVLCQNNNGQTGLHFGDPNLTSQKSEM
NKVYQDTPVELDQLLYISDYPCGDLFFEERHSTASETSPPSEANKEPDETSDFMLSWLFS
PKLTDVVGKNFAFEEASLHTLNGQTEIIINSSAPVLSSQSEWDSKSNPGDSLLSIAPPSE
DQTCVASESLGVSHDVSEGLPEVSREEAPVQSRATLSRETGDKGLFLDQVTAPLVNSSLT
PQELPENSLPRNHSSTSPTCPSESLLDLDGLELDSDHPTGAQLDPTQDATQTLFRTLALQ
DQSDSAPVIWSLTDSPDEDVFTNGDLICGSFCVESTSKDLMESKICSNEEMALDGAWNLN
PPEGVNEEPAPVNNQQDFNVLDLSGCPEKTGWMIEQSVETVSLSKMVGDDSVPMVSAVNA
KEQDASPLKTVFDALDQDGDGFVRIEEFMEFATAYGADQVKDLTKFLDPSGLGVISFEDF
HRGISAIGNGGPEPQLYSANYSPGDGAVGCPEEYDEQNEVTDSAYLGSESTYSECETFTD
EDTGALVPPEMHEDVDTDSGIEAALHDPEEAINRFSLNSERHNPSLVAVIGGEEEHFEDF
GESNTSELLQESTEEGADVSLDCSLAQSPQQIDVSALLSPSAPAPLPDCFQSFLKEEALD
FFCSQCHKQISRLEDLSTRLNFLEMTSAGKRLSSKKVARHLLQNNSITLDTVSDLTRDIL
ELADNDITDKMLLLERRVAELEKESETSGEQHARLRQENLQLVHRANAFEEQLKEQEMLA
DEQLEHETRRHKEALSKMERERGLEMENLQSRLQQLEEENSELRSCVPCLRANIERLEEE
KLKLEDEVDVMNDKWRDEMETRQKMADKLSHERHQNQKEKESTQELIEDLRKQLEHLQLY
KLEAEAKRGRSPSAGLQEYQTRTREAELEQEIKRLKQDNRSLKEQNDELNGQIINLSIQG
AKSLMSASFSDSLAAEINSVSRSELMEAVHKQEEINYRLQDYIDKIIVAIMESNPSILEV
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggaacccacggtggtgtctagccctttggggcatgcgcagtgggaatcggagcaatcg
tttcctctcggatttctcaccctggactcagacaatggaggtgtcctgtgtcaaaacaac
aacgggcagacaggtttgcattttggcgatcccaatctgacatcccagaaaagtgaaatg
aacaaagtctaccaggacactccagtagagttggatcaacttttgtatatttccgattat
ccctgtggagatttgttttttgaagagcgtcactccactgcttcagagacttctcctccc
tcggaagcaaacaaggaacccgatgaaaccagtgacttcatgctctcgtggctgttttct
cctaagcttactgatgtggttggaaaaaactttgcatttgaggaggcctctcttcacacc
ctcaatggacagactgagataatcatcaacagtagcgctccggtactgtcttcccaatct
gagtgggattctaaatcaaacccaggagattcacttctttccatagctcctccctcagaa
gatcagacttgtgttgcctcagaatcattgggtgtgtcacatgatgtcagtgaaggactg
ccagaagtatcacgggaggaggctccggtacagagcagggcgactttgtcacgtgaaact
ggagacaaaggtttattcctagatcaagtgacagctccgctagtaaacagtagtttgacc
ccgcaagagctacctgagaacagtcttccacgtaaccacagcagcacatcaccaacttgt
ccttcagaatctttattggatttagatggtctagaacttgacagcgaccatccaacaggt
gcacagctggatccaacccaggatgccacccaaacgctattcaggactttagctctccaa
gaccagagtgactcagctcctgtgatttggtcgctgacagactctccagatgaggatgtc
ttcaccaacggtgacctcatctgcgggagcttctgtgtggaaagtacgtcaaaagatttg
atggaaagcaaaatatgctccaatgaggaaatggctttggatggagcgtggaacttaaat
ccgccggagggagtaaatgaggaacctgctcctgttaacaatcagcaggattttaatgtc
ctggatttgagcggttgtcctgaaaaaactggatggatgattgagcaaagtgtggagact
gtttccctctcgaagatggtgggagatgactcagtaccaatggtttcggctgtgaacgca
aaagagcaagatgcctcgcctctcaaaactgtcttcgatgcgttagaccaggacggagat
ggatttgttcgcattgaggagtttatggagtttgctaccgcctatggcgccgatcaggta
aaagatctcaccaagtttttagatcccagcggtctgggagtcatcagttttgaagacttc
caccgagggatttccgctatcggcaatggaggtcccgagccgcagctgtacagcgcaaac
tacagcccgggcgacggagccgtcggttgtccggaagaatacgacgagcaaaatgaggtg
acggacagcgcttacctgggttccgagagcacctacagcgaatgcgagaccttcacggac
gaggacacgggcgccctcgtgcctcccgagatgcacgaggatgtggacacggacagcggc
atcgaggcggcacttcatgaccccgaagaagccataaacaggttctcgctcaactcggag
cgacacaacccctccctagtggcggtcatcggtggcgaggaggagcattttgaagatttc
ggggagagcaacacctcggagctgctgcaagaaagcaccgaggagggcgccgatgtctcg
ctcgactgctctctggcacagagccctcagcagatcgatgtctccgctctgctctcgccg
agcgcacccgctcctctcccagactgctttcagagcttcctcaaggaggaggcgctggat
tttttctgtagccaatgtcacaaacaaataagtcgtctggaggacctctccacccgtctc
aatttcctagagatgactagtgctggcaaacgattgtccagcaagaaggtggcaagacat
cttctgcagaacaactcgataacgctagacacggtcagcgacctcacccgtgacatcctt
gagttggctgacaatgacatcacagacaagatgctactacttgagcgtcgcgtggcggag
ctggagaaggagtcggaaacttcgggggagcagcacgcgcgcttacggcaggagaacctt
caactggtgcaccgcgccaacgcttttgaggaacagctgaaggagcaggagatgctcgcc
gacgagcagctggagcacgagacccggcgccacaaggaggccctgagcaagatggagagg
gaaagaggtctggagatggaaaacctgcagtccagattgcagcagctggaggaggagaat
agcgagttgaggtcctgcgttccttgcctacgagcaaacatcgagagactagaagaggaa
aagctgaagctggaagacgaggtagacgtcatgaacgacaaatggcgggatgagatggag
acccgacagaaaatggccgacaagctgagccatgaacgccatcagaaccaaaaggagaaa
gagagcacgcaggagttgattgaggacctgcggaagcaactggagcacctgcagttgtac
aaattggaggcggaagcaaagcgaggccgctcgcccagcgccggactgcaggagtatcag
acccgaacccgggaagcagaactggaacaggagatcaaacgactcaaacaggacaaccgt
agcttaaaggagcagaacgatgagctgaacggccagatcatcaacctgagcatccaggga
gcaaagagcctgatgtccgcttccttttccgactccctggcggccgagatcaactcggtg
tcccgctctgagttgatggaggccgtccacaaacaggaggagatcaactacagactccag
gactacattgataaaataatcgtggccatcatggagtccaacccctccatccttgaggtc
aaatag
DBGET
integrated database retrieval system
