Syngnathus scovelli (Gulf pipefish): 125991794
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Entry
125991794 CDS
T08785
Name
(RefSeq) liprin-alpha-3
KO
K26226
liprin-alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125991794
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125991794
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Tc-38
Motif
Other DBs
NCBI-GeneID:
125991794
NCBI-ProteinID:
XP_049616158
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Position
21:7674124..7685559
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AA seq
1242 aa
AA seq
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MMMCEVMPTISEDGRSGTTGGASPPAGPGVGGPGGAMGAGGAGGGFSGRDIRSGGDEGGS
TGNLESLMVNMLTERERLLENLRETQESLGTAQLRLRELSHEKESLQRQLSIALPQEFAV
LTKELNVCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPA
GVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERVSMLEDQLAASSQEVISLRDQIKR
RQQGVDGGKDRLPNGPASGLEDSELERQREVEIERQRAELSQLKERLALMCRQVGEIEEQ
LAAARREVTKSEEANQKLQREVKEALCQREDMEERITTLERRYLSAQREATSLHDIKDKL
ENELASKESLHRQSEEKNRQLQERLDEAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAE
ERHGNFEERLRQMEAQLEEKNQELQRARQREKMNDEHNKRLSDTVDKLLSESNERLQLHL
KERMAALEEKNALSEELANMKKIQDDLLANKEQLLAELERIQLELDQLRGRPGSSYSRAG
SVSSLPSTLFRRSLPGSASELRYPQGGGSLPAGYSSSSGAVVVRRTHRGRWGQARDDCNK
YGEWDAGSMMGPGFEGPEGVCSDDDDDRETLFGSELLSPSGQTDVQTLAIMLQEQLEAIN
KEIKLIQEEKENTELRAEEIESRVSSVALDTSSIPPSSLGGRDSVGRGYMTPSITSSTLA
SPSPPSSGHSTPRLPHSPARETERLNSKDGEECRALALIDSNPPAVPRALRLDRMTHTHP
GAGLDDHREFRSLSADGAITASQDSLHKASKKKSIKSSIGRLFGKKEKGRIGAPGRESTS
LASTPSDDLGPADPLGLAKLGTGTVEKDRRSKKKHDLLEEACRQGLPFASWDGPTVVTWL
ELWVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSP
SAPASTRSSTSNIWMTHAEMESLAAATKPEQKEFSWDQILAYGDMNHEWVGNEWLPSLGL
PQYRSYFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERR
REDSQHQNQDVMVWSNERVMCWVQSIGLKEFADNLLESGVHGALLALDDTFDYTDLALLL
QIPNQNTQARQILEKEYNALISMGTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSS
ETLPANFRASAISTPSVTLRKVQSEVNSGQRGESASVRTYSC
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtgtgaggtgatgcccaccatttctgaggatgggcgaagcggcacgaccggg
ggcgcctcccccccggccggacccggggtgggaggcccgggcggtgccatgggagctgga
ggagcaggagggggctttagcgggagggatatccgaagcgggggagacgaaggaggcagc
acgggcaacctggagtctctgatggttaacatgctgacggagagggagaggctgctggag
aacctgagggagacgcaggagagcctggggacggcccagctccgcctacgagagctcagc
cacgagaaggagtctcttcaacgacaactctccatcgctctgccacaggagtttgccgtg
ttgacgaaagagctcaacgtttgccgggagcagcttctggagagagaggaggagatttct
gagctcaaggcggagagaaacaacactcgcttgctgctggagcacctggaatgcctggtg
tcccgtcacgaacgcagtctgaggatgacggtggtcaagaggcaagcccagtcgccagcg
ggggtctccagtgaggtggaagtcctcaaggccctcaagtctctctttgagcaccacaag
gctctggatgagaaggttcgagagcgtctccgagtggccctggagagggtgtccatgttg
gaggatcaactagcagcgtcttctcaagaggtaatctctttacgagaccaaattaaaagg
cgtcaacaaggggtggacggcgggaaagatcgactccccaacggccccgcctctggcctg
gaggacagcgagctggaaagacagcgggaagtggaaatagagcgtcagagagccgaactc
tcgcagctaaaagagaggctggccctcatgtgccggcaggttggcgaaattgaggaacag
cttgcggccgccaggagggaggtgacaaagtcggaggaggccaatcagaagctccaacgg
gaagtcaaagaggccctttgccaaagggaggacatggaggaaagaattacgacactggaa
cgcaggtacctaagcgctcaaagggaggccacgtccctccacgacatcaaggacaagctg
gaaaacgagctagccagcaaggagtccctccatcggcagagcgaggagaagaaccgccaa
ctgcaagagcgtctggacgaagccaagcagaagctccagcaaaccctgcaaagagccgag
acgctgccggagatcgaagcgcagctagcgcagagagtcgccgcgctcaataaggcggaa
gagcgccacggtaattttgaggagcgactacggcaaatggaagctcaactagaagagaag
aaccaagagctgcagagagcgaggcagagggaaaaaatgaacgacgaacacaacaaacgt
ctctcggataccgtcgacaaacttctgtctgagtccaacgagagacttcagctgcatctt
aaagagaggatggcagcgctggaagaaaaaaatgctctctcggaggaactggccaatatg
aagaaaatccaggatgaccttcttgctaataaggagcagctccttgctgagctggaacgg
atccaactggagctggaccagctgaggggcaggcctggctcatcttattccagggcgggc
agcgtgagctcccttccgtccaccttgtttcgaagatcccttccggggagcgcctcggag
ctgaggtacccccagggcgggggctcgctcccggccggctacagcagctcctccggcgcc
gtggtggtcaggcggactcaccgcggccgctgggggcaagctcgggacgactgtaacaag
tatggggaatgggacgccggtagcatgatgggtccgggtttcgaaggcccggagggagtc
tgctccgacgacgacgacgacagggagactctgtttgggtcagagctgttatcgccgagc
gggcagacggatgtacagactttagccattatgctacaggagcaactggaggccatcaac
aaggagattaagctcatccaggaggaaaaggagaacacagagttgagggcggaggagata
gagagtcgggttagcagcgtggcactggacacgtcctccattccgccttcctcgctcgga
ggacgggacagtgtcggccggggatacatgaccccctccatcacctcctcgacattagcg
tctccttcacctccgagctctggccattccaccccccgcctaccacattctcccgccagg
gagactgagcgactgaacagcaaagatggcgaggaatgccgagcgctagccttgatcgac
tccaaccctcccgctgtccctcgagccctgcgactagaccggatgacacacacacaccca
ggagccggtctggatgatcacagggaatttcgcagtctctctgctgatggggccatcacc
gccagccaggattccctccacaaagccagcaaaaagaaaagcatcaagtcctccatcggg
cgtctttttgggaaaaaggaaaaggggaggatcggtgctcctggacgcgagtctacctct
ttggcctcaacaccgtctgatgacttgggcccggcagacccattgggtctggctaaactc
gggacaggaactgtcgaaaaagaccggcgaagtaaaaagaaacacgacctgctcgaggag
gcttgtcgtcaaggtttacccttcgcctcgtgggacggtccgacggtcgtcacgtggctt
gagttatgggtgggaatgccggcatggtacgtggcggcgtgccgcgccaacgtgaagagc
ggcgccatcatggccaacctctccgatacggagatccagagagagatcggcataagcaac
ccgctgcacaggctcaaactccgcctggccatccaggaaatggtttccctcaccagcccg
tcggcgccggcgagcacacgctcgtcgaccagtaatatttggatgacgcacgctgagatg
gagtcactcgccgccgccactaagccagagcagaaagagttcagctgggatcagatcctg
gcttacggagatatgaaccacgagtgggtggggaacgagtggctgcctagtttaggttta
ccccagtaccgctcctacttcatggagtccttggtggacgcccgaatgctcgatcacctc
accaagaaagagttgaggggccagctgaagatggtggacagcttccacagggtgagtctt
cattacggcatcatgtgcttgaagcgcttgaactatgacaggaaggagctggagaggagg
agggaggatagtcagcatcagaaccaagatgtgatggtgtggtccaacgagcgggtgatg
tgttgggtgcagtccatcgggctcaaagagtttgcagataacctgttagaaagcggagtt
cacggagctctgctggctctggacgacaccttcgactacaccgacttggcccttcttctg
cagatacccaatcagaacacgcaggcaaggcagatcttggaaaaggagtacaatgctctc
atctccatgggaacggagaggaggcccgatgaggacggcaccaaaacattcacacggtcg
ccttcgtggagaaagatgttccgggagaaagacctccgaggcgtcacctccgactcttcg
gaaacgttaccggccaacttccgtgcctctgcgatctcgacaccttctgtcaccctgagg
aaagtccagagtgaagtgaactcgggtcaaaggggagagtcggcgtcagtaagaacatat
tcctgctaa
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