Syngnathus scovelli (Gulf pipefish): 125991937
Help
Entry
125991937 CDS
T08785
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125991937 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125991937 (nup107)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125991937 (nup107)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125991937 (nup107)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125991937 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
Motif
Other DBs
NCBI-GeneID:
125991937
NCBI-ProteinID:
XP_049616305
LinkDB
All DBs
Position
22:599710..605026
Genome browser
AA seq
907 aa
AA seq
DB search
MDWGQSELLSPVVREDVVTVAGRRMKKVAFPSPGNSNVGAPMVTPARSTLKNTPASLFRQ
AVTPRVSDVSAVWAHAGQTPHSAHTRRTTLGSLNLDDSDWTNSLYASPVAALGNSSFFTE
DIAQLGSALLKDDDPGEAAAASLFPDFLASFLKHSSSGIFELLEDYQSLCQDKVDVLQSV
VLRAGPSSKTAGVRWLLQQESHTWRLISSLYRDRVQSAPEDDMAVDVAFPTESEKMAVEH
LFQRDATVRQSQLVVDWLESIAQDQMADFSDNIEYYSKSVCWENTLHSLKLRRKSGNVFT
VPLVTELDPDAPLRQQRPLADLDREDDARLLKILFTLIRAGMTEEAQRLCTRCGQAWRAA
TLEGWKLYHDPNINSGSAELRPVEGNPQRGIWKACTWRMAAEEQLNRYERAIYASLSGNL
KPVLAVCESWEDCVWAYFKVMVDTLVEKHLISSGMAHQEVEMLPREYLEANWTLEKVFEE
LQASESKRVLEETQEHYHVIQKFIILGDLDGLLEEFRDWLTAPKALPSHLLRFVTHLLLF
FRSMGVALKEEACVEVLKAYVNLLVADRQTNLVASYVSQLPADLATAHYAAFLETISQPE
VRPRCLQLAAEAGLDVAAVTKLVVETVRERDDGEFTPHGQLPETGTTKDDEKKIDVIDWL
LFEPAHRAEALKQSNAIMRRFLALEKHDAAKAVFSKVPEDSIKEIYCRWSGLGQTSPLPA
EDDNVIREHLCLRAYLEAHEAFADWFAHNSAVPQKPAPAPEAKFTEQVANEMREKEYQAA
LSAWSDRLDVMAEDVKERIYNVLLFVDGGWMVDNAQDSEPDAERGHQMSALRSLCLPRLS
FLLLSVLQSSSRHQEALRLADIISSDQHRLYEVFSKDELRRFLSKLRESSLALLDQGLDP
LGYDLQP
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggactggggtcaaagtgagctgctgtctccggtggtccgagaagacgtggtgacagtc
gctggccgtcgaatgaagaaggtggcattcccctcacccggcaacagtaatgttggcgct
cccatggtaacgccggcgcgctccacattgaagaacacgcctgcctcacttttcagacaa
gctgtaactcccagggtttccgatgtttccgccgtatgggctcacgcgggccaaacccct
cactccgcacacacgcggagaaccacactcggcagtctgaatttggacgacagcgactgg
actaacagcttgtacgcgtcgcccgtggcggctttggggaacagcagcttcttcacggag
gacatcgcccagctcggctcggccctgctcaaggacgacgaccccggagaggccgcggcg
gccagtctgttccctgatttcctggcgtcctttttgaaacactcctcgtctggcatattt
gagctgttggaggattaccagagcctctgccaggacaaggtggacgtgctccagtcggtg
gtgctgcgagcgggtccgagcagcaagacggcgggagtgcgctggttactgcagcaggag
agccacacctggagactcatctcctccctgtacagggatcgcgtccagtcagcgccggaa
gatgacatggcggtcgacgtggcatttcccaccgaaagtgagaaaatggcggtggagcat
ctcttccagcgcgacgccacggtccgtcaaagtcagttggtcgtcgattggctggagagc
atcgcccaggatcagatggcagacttttccgacaacattgaatattactccaaaagtgtc
tgctgggagaacacgctgcactcactgaagctgaggcgcaagagcgggaacgtcttcacc
gtccccctggtcaccgagctggaccccgacgcccccctccgccagcagcgacccctggcg
gacctggaccgggaggacgacgcccgtctgctgaagatcctgttcacgctcattcgggcc
ggcatgaccgaggaggcccagaggctgtgcacacgctgcggtcaggcctggcgagcagcc
actctggaaggctggaagctctaccacgatcccaacatcaactcaggcagcgccgagctg
cgcccggtggaaggaaaccctcaaagaggcatctggaaggcctgcacctggaggatggct
gccgaggagcagctaaaccgatatgagcgagccatctatgccagcctgagtggaaatctt
aaaccagtgctggctgtgtgtgaatcgtgggaggactgcgtgtgggcgtacttcaaggtg
atggtggacacactggtggagaagcacctgatctcttcagggatggcccaccaggaagtc
gagatgctcccacgggaatacctggaagccaactggacgctggaaaaggtgtttgaggag
ctccaggcatcggagtcaaagagggtcttggaggagacgcaagagcactaccatgtcatt
cagaagttcatcatcctgggagacctggacggtcttctggaggagttccgcgattggctg
acggcccccaaggcgctcccgtcgcacctgctgcgtttcgtgactcacctactgctcttt
ttccgctccatgggtgtggccctgaaggaggaggcatgcgtggaggtgctgaaggcctac
gtgaacctgctggttgcggaccggcagacaaacctggtggccagctacgtcagtcagctg
ccggccgacctggccaccgctcactacgccgccttcctggagaccatcagccagccggag
gtccggccgcgctgcctgcagctcgctgccgaagccggtttggatgtggccgctgtgacc
aaactggtggtggagaccgtgcgggagcgagacgacggcgagttcacgcctcacggccag
cttccggagacgggaaccacaaaggacgacgaaaagaagatcgacgtcatcgactggctt
ctgtttgagccggcccaccgagccgaggccctcaagcagtccaacgccatcatgaggaga
ttcctggctctggagaaacatgacgcggccaaggcggtcttctccaaagttcccgaggat
tccatcaaagaaatctactgccggtggtcgggactcggccagacgtcgcctctgcccgcc
gaggacgacaacgtcatcagagagcatctgtgcctcagagcctacctggaagcccacgaa
gccttcgccgactggttcgctcacaatagcgccgtcccccagaagcccgcacctgcgccc
gaagccaaatttacagagcaagtagccaatgagatgagagagaaagagtaccaggcggcg
ctgtcggcctggtccgaccgcctggacgtcatggccgaagacgtgaaggagagaatctac
aacgtgctcctgtttgttgacggcggttggatggtggacaacgctcaggattcggagccg
gatgccgagcgcggccaccaaatgtcggcgctgcgctcgctgtgtttgcctcgcctcagc
ttcctgctgctcagcgtgctgcagagctcctccagacaccaggaggcgctgcggctcgct
gacatcatctcctccgaccagcatcgcctctacgaggtgttttccaaggacgagctgaga
cgcttcctttcaaagttgagggagtcgtccctggcgctattggaccagggactcgacccg
ctcggctacgacttgcagccatga
DBGET
integrated database retrieval system
